Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00831 ATGGAACCTGTTGGAGCCTTCCCTGATGGAGGATGGGATTGCTTTCGCAGAATGTTTGCCAGTGAGGATCATGGGCATGATTTCACACCGGAATTTCCTCTTCTGCTTGGTGGGGGTGATGAATTAAACATTGTGACACAAGAAGCCAATTTTTGTGCTGCTCCTGAAGCTGGTGAAAATGAGCTGATGTTTTATTCTTTAGATGCTCTTGACTCAAATTCTTCACAGTATATTTCTCAGGAAAGTAGCTATAGTAATAGTAGCAATTGTAGTGGTGATGACACTGTCTTCATTGCCAATCCGGGTAACTCAAACTATTATTTTAGTTACCCTGATCATATGTTAGCACATAATGCATGTGTATATTCCTTGGATGAGAAACATTTTGCTCCTTTTGCTCCGTCGCTTGCTAACATTGTAACCGAAGAGAGTGTGAAGCTGTATGAAGATTTGGCAAGTGACAGATTGGAGAATTCTGAATGCAATCAAATGGAACCTATTGTTTTTCCCTCCAAAAGGAAGCTTGATGTGCCTGCTGAAGGTAAAATCGACAACAGATCAGAGAATCACAAGAAAAAAGCTCGAGTTTTAAAAGAACTGCAAGGATGTATGAAGAACACATGGTCGAAGAAGAATAAACAACATGGAAGCAATAGGGAAGAGGCAGAAGAGACTAATGCAGGATCAGATGGACAAAGCTCTAGTAGTAACATGTCAGAGGATGATAACAAGGAAAATGGAGGAGGAGCTACTTCAGGCTCTAAATCTAAAAGAAGAGAGAGAATAAATGAACGATTAAGAATCCTACAGAATCTTGTCCCTAATGGAACCAAGGTTGATATAAGTACAATGCTTGAAGAGGCAGTCAATTATGTGAAATTTTTGCAGCTCCAAATCAAGCTCCTAAGCTCTGATGATCTATGGATGTATGCTCCACTTGCTTATAATGGACTTGACATTGGACTCAATCTGAACTTGAAGAACTCTCTACCACTCTGA 999 0.3994 MEPVGAFPDGGWDCFRRMFASEDHGHDFTPEFPLLLGGGDELNIVTQEANFCAAPEAGENELMFYSLDALDSNSSQYISQESSYSNSSNCSGDDTVFIANPGNSNYYFSYPDHMLAHNACVYSLDEKHFAPFAPSLANIVTEESVKLYEDLASDRLENSECNQMEPIVFPSKRKLDVPAEGKIDNRSENHKKKARVLKELQGCMKNTWSKKNKQHGSNREEAEETNAGSDGQSSSSNMSEDDNKENGGGATSGSKSKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPLAYNGLDIGLNLNLKNSLPL* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00831 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 246 295 IPR011598 GO:0046983
Lapu8g00831 332 FunFam Basic helix-loop-helix transcription factor 250 304 - -
Lapu8g00831 332 Pfam Helix-loop-helix DNA-binding domain 257 296 IPR011598 GO:0046983
Lapu8g00831 332 Gene3D - 254 304 IPR036638 GO:0046983
Lapu8g00831 332 MobiDBLite consensus disorder prediction 227 253 - -
Lapu8g00831 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 257 310 IPR036638 GO:0046983
Lapu8g00831 332 CDD bHLH_AtIND_like 257 309 - -
Lapu8g00831 332 MobiDBLite consensus disorder prediction 207 260 - -
Lapu8g00831 332 SMART finulus 252 301 IPR011598 GO:0046983
Lapu8g00831 332 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 87 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00831 Lapu-Chr8 26469480 26471491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00831 209 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 59.124 2.61e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu8g00831 HLH 9.1e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00831 8 26469480 26471491 Lapu8g00831 8 26469480 26471491 ECH