Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00830 ATGCGTGGAGAGCACAGGGGATTCGTGCACTGCGTCCCGAGTCCAGTCCCGCCGTCACTCGCCATGGCCTCCGTGGAGCAGCCTCCCAAGAAGCGAAAGCTTTACGAGCCTTTACCAGAACCGCCACCGACTTCGCCTCCCTCATCGCCGCCGCCGGCAACCGAACCAACCCCTCCCTCTCCGCAAACCCTACCCCCGCCGTCTCAGGAGGAGATTCTCGCGAAGCGGCGGAACAAGGACGAAATTCGAAGCGTCTTCGATGGTTACAAACGGATTCAGCGTTGCTTGCTTCAGAAAGACGCTCCTTCCTCCATGGCAGACCTTGAACAGAGTTATCTCGCGCTCATTACTTCTTCCAGAGGTTGTATGAGTGTACAAAGAATTGTAGCCGATCTTATTCCTCGATATGCATGTCACTGTCCAACAGCCTTGGAAGCTGCAGCTAAAGTTGTTATTAAGATGCACAACTTTAGTTTGGCATCGATAAGTAGGGGAGAGGATTCCAGTGGTATTGCATTTGAAACTGCTAGAGCCTGTATTTGTGGCCTAGCTGATGTCTGCTGCGTTGCTTCATCCGTGGCACCAACATCAGCTGTAATTAGAGGAATTTGCTCAGCAGTTTTTCAGAACGTTCTCACCTTTTTTATAGCCTTATTTGAAGGAAAGGATATCTTACAAATGGTCGACAAGAATTTCCTGAATATGCAAGATACACCTGAGGTCTTCTCTGAGTTGAAACAAAAGGTTTTAGAGGAGGATGAATCTCCATTGACTAAACTGTCCAAGTTTCGAGTCTTATGTTTGCTTCGGATTTTTTTCTCGTGTCCAAAAGATTTGCTTGCAGCTTGTTTGGATCTCTTAGATTCTGCCACAAAAGAGGGAACTAATAATGATGGAAAGCATTTTTTGAGCCAGGTGACTAGCATGTTTGATGATGATAAGGCAGTTCACCTTTTGGATAATGCAATTGGTGGACCCAAGTCATGTACAGATTCTACTGGGTCAGGAATCAGAGATGACGAGGCAGTTGAGGAAATTGTGACGGAAGACAACCATATTTCTGGTGGTGATTCATCTGTTGGCAAGAGCTGCTTGCTTATACGGGTTCTTGACAAGGATCCCCCACTGCGCAAATGGATGTTGTGTAGATGTAAGAAGTTACTTGACTTGCTCCCAAATGCATCACTGGAAATTATGTCAGTACTGCAAGGAATTCTTGGAATGTTTGCTCAACAAACAGATTTGGAAGACTGTCAAGCAGATAGTGATGAAGATAAATCCGATTCTTCAATTTACATGAATAGTAGGAAGTACATGGTTCCTAGAGTCTCTGAGGAACATGAAAGCATCGGTGAATCATCTGGAAAAGGCAGCAATTTGAGAGTGCATGTTGGTTCTACTGATGGTTTTACTGATAAGGTTTCTGATAAATATGTGATAGCTCATAGCTCTGCAGTTTCTCTTGACAATACTCCAGCATTAAAAGTGGGTTTGCATTATGATAATGGAGTCTCAAAGACAATGAGCATTGGGACGGGGGAAGAAGGGAATGTGCCAAATGTTAGATGTTCCACACCTAGGGACTCGGTAAGCCATCAGATATTCTCACCTGCAGTTAGAACACCAGTAAATTTTAGGAGTAATTCATTTGAAGGTAGAAATGATTTCCTGAGTGTAGAGAAAAATCAAGTCTCAAGTATGAATTTCAGTTCACCTCCGTTGAGATCCTCCAGTGGATCTGTCAGTAATTCTTTGGCTTCTCCTAATAATCATTTTATGTCACCACCAGCTTCAACAAAAAGTCAAATTGTCTGGTGCTGTGATGGGGATCCTGCAGCCATGGATATTGTCTCTGCTTCTAGGCTGCTATGGATAGGTTATGTGGGATCTGATGTGCCTGAAAGTCATATTAGGTTTCACTTAGAAAGATTTGGTCCTATTGAAAAATTTATTTTCTTCCCAGTTAAAGGATTTGCCTTGGTCGAGTACAGAAGAATCATTGATGCAATAAAAACTCGACACTGTTTACCTGGATGTTTTCCTTGCCGTGTAAAATTCATGGATGTTGGACTTGGAACTAGGGGTGCAATGAATGGTGTTGCAGTTGGCTCTAGTTCTCATATTTATGTTGGAAATATTCCGAGTCAATGGGCCAAGGATGAGATTATGCATGAAACAGGAAAAATGATCCATAAGGGTCCTCTTGCATTCATTGATCTTAGCTGTGAGTTTGCATTACTTATGGAATTTGAAACGCCTGAAGAAGCTACAGCTGTCATGTTGCATCTGAGACAACTCCGAAGAGAAAGAAGTAACTACAACCAGCATTTTGGTCCAGGAACACTTAATGTTGGAATTGGTCATGCTTATATGGATGGTGCAAGACCTGTACCTGCCCCTCCGCCCCCTCCCCATCTTGACCTTCAAGTTAGCAACTCTGCTGGGTCACCACATGCTCGAACTCTACCAGGGAGCCCTGCTGATAGCAGCCGAACGGGGATGGCTCACTTGTCCGCCTTACTTGCTTCATTGCGCTCAAAGTATAATATTAATCAAAACCTAGGTCTCAATGATAATTATATGACTGTGAATAATTGTCCTTCCATGCGTGAGGAAGATATGGTGCCATCCAGCACTCTGTGCATAACTATTCCACATTGTAGTAGCTCTATGTTCCTTACAGATGATGAGTTAATGGCCATTTGCAATCTTGCCATTGGAAACGCTGGATCCATTTTGCAGTTGACGCAAGCAAACATGCAAATGGGATGTAGTTGGTTTGTTGAATGCAGTAATATTGATGGTGCAGTTTCTGCTCTAAAGAATCTCCGCGGATGTCCAGGATTGTTCTTCCAGATAGAATTCAGCAAACCTGGACATCAGAACATTGTACCATTTTCAGTTAAACCAGAGATCAATTCTATGGAGCTTGTATCCCCCAGGATAAATTCTGAAAATCATACTAGTGGAATACAGAGTGCACCTCTGCCTCATTCAAACTGGCACTTTCCTGGTTCTAGGGAGATGTCAGAGGTTGGAGCAAGGAAACCTGATGGTTATGATAATTTGTCACAGGATCCTCATCAAGGAGGTAATGTTCCACATTCACTGTCCGGAGCACATGGACCTTCCATCCCACCACCGCAGCAAATTCAGTCATCTACTTTTGTTCACCCTGTTTATGCCCCCCCAAATGGTCCATGGGATCATCGTGGAATAAATAATCCTTTACCTGTCAGCCAATTCAACACAGGAGTAGTGCCAAATAATTTTCATGGTAATGCTGTTGCAAGTCCTTTTATTCCTGCTTCAGTGACTCCACTTGCTCAGATACAAGGAACTCCAATGCATCCCTATAACCAGCAGGTGCCACCATCAATTATACCACCACCTTTATCATCCTTGCCACCTCCTCAGCCTGAAATGCCACCTCCAGTTCCTCCTTCTCCGCCACCTTTACCCCAGGTTCAGCCACCCTTGGTTCCTCCACTGCCCAGTTCCCCTCCTCCCCCTCCTCCTCCCCCACTGCCTGTCCAAGAACCAGTCAATATGGAATGTTCGGAGCAGTCTTTGCAGTATCAATGGCAGGGGAATCTATGTAAAAGTGGGGTCAATTACTGTACAATTTATGCATGCAAAGCTGATTCAAATATTTGCCGATATTCAAATGCCATACCCGAGCCTGCTGAGTGGCCCACAAAATTAGACATGACAAAACGCACAGATCTTCGACATGTAAAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTCTGATCCCATCTTCCACTAGTGACCACAGAAGGTTTCAGGATTTCATATCATACTTAAAGCAGAGGGACTGTGCTGGGGTTATTAAAATCCCAGCTTCAAAATCCATATGGGCAAGGCTGTTATTCATTCTCCCCCACTCACTTGAAACCTGCTCTTTGCTTTCTATTGCACCTGATCCCTCAGATTGCCTCATTGCTTTGGTTCTTCCCAAAGAAACAAACTTTGAGTGGATATGA 4023 0.4425 MRGEHRGFVHCVPSPVPPSLAMASVEQPPKKRKLYEPLPEPPPTSPPSSPPPATEPTPPSPQTLPPPSQEEILAKRRNKDEIRSVFDGYKRIQRCLLQKDAPSSMADLEQSYLALITSSRGCMSVQRIVADLIPRYACHCPTALEAAAKVVIKMHNFSLASISRGEDSSGIAFETARACICGLADVCCVASSVAPTSAVIRGICSAVFQNVLTFFIALFEGKDILQMVDKNFLNMQDTPEVFSELKQKVLEEDESPLTKLSKFRVLCLLRIFFSCPKDLLAACLDLLDSATKEGTNNDGKHFLSQVTSMFDDDKAVHLLDNAIGGPKSCTDSTGSGIRDDEAVEEIVTEDNHISGGDSSVGKSCLLIRVLDKDPPLRKWMLCRCKKLLDLLPNASLEIMSVLQGILGMFAQQTDLEDCQADSDEDKSDSSIYMNSRKYMVPRVSEEHESIGESSGKGSNLRVHVGSTDGFTDKVSDKYVIAHSSAVSLDNTPALKVGLHYDNGVSKTMSIGTGEEGNVPNVRCSTPRDSVSHQIFSPAVRTPVNFRSNSFEGRNDFLSVEKNQVSSMNFSSPPLRSSSGSVSNSLASPNNHFMSPPASTKSQIVWCCDGDPAAMDIVSASRLLWIGYVGSDVPESHIRFHLERFGPIEKFIFFPVKGFALVEYRRIIDAIKTRHCLPGCFPCRVKFMDVGLGTRGAMNGVAVGSSSHIYVGNIPSQWAKDEIMHETGKMIHKGPLAFIDLSCEFALLMEFETPEEATAVMLHLRQLRRERSNYNQHFGPGTLNVGIGHAYMDGARPVPAPPPPPHLDLQVSNSAGSPHARTLPGSPADSSRTGMAHLSALLASLRSKYNINQNLGLNDNYMTVNNCPSMREEDMVPSSTLCITIPHCSSSMFLTDDELMAICNLAIGNAGSILQLTQANMQMGCSWFVECSNIDGAVSALKNLRGCPGLFFQIEFSKPGHQNIVPFSVKPEINSMELVSPRINSENHTSGIQSAPLPHSNWHFPGSREMSEVGARKPDGYDNLSQDPHQGGNVPHSLSGAHGPSIPPPQQIQSSTFVHPVYAPPNGPWDHRGINNPLPVSQFNTGVVPNNFHGNAVASPFIPASVTPLAQIQGTPMHPYNQQVPPSIIPPPLSSLPPPQPEMPPPVPPSPPPLPQVQPPLVPPLPSSPPPPPPPPLPVQEPVNMECSEQSLQYQWQGNLCKSGVNYCTIYACKADSNICRYSNAIPEPAEWPTKLDMTKRTDLRHVKSTFAATPSHRREVCRLIPSSTSDHRRFQDFISYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAPDPSDCLIALVLPKETNFEWI* 1341
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00830 1340 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 22 1291 - -
Lapu8g00830 1340 MobiDBLite consensus disorder prediction 568 587 - -
Lapu8g00830 1340 CDD SPOC_FPA-like 1194 1332 - -
Lapu8g00830 1340 Pfam SPOC domain 1188 1331 IPR012921 -
Lapu8g00830 1340 MobiDBLite consensus disorder prediction 1 68 - -
Lapu8g00830 1340 MobiDBLite consensus disorder prediction 985 1051 - -
Lapu8g00830 1340 MobiDBLite consensus disorder prediction 1122 1178 - -
Lapu8g00830 1340 MobiDBLite consensus disorder prediction 795 831 - -
Lapu8g00830 1340 MobiDBLite consensus disorder prediction 38 66 - -
Lapu8g00830 1340 Gene3D - 612 691 IPR012677 -
Lapu8g00830 1340 MobiDBLite consensus disorder prediction 1113 1178 - -
Lapu8g00830 1340 SUPERFAMILY RNA-binding domain, RBD 610 680 IPR035979 GO:0003676
Lapu8g00830 1340 MobiDBLite consensus disorder prediction 809 831 - -
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00830 8 26449842 26459610 Lapu8g00830 8 26449842 26459610 ECH