Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00828 ATGAAGAAGAACACACACATCATCATGACCCATTCCCCTGCCACTCCAAGGTCATCGACAGCAGCAGCAGCACCTCCAATGGATCCCAAAATTTGGAGCAAATTGCCACCTGAAATCCTTGAGTACATCCTCTCCTTCCTTCCTCTCAAAACCTTCTTGAATCTCAGATCCACTTGCAAAGGGTTTTGGTCTCTCATATTCTCTCCCTCCTTCATTTCCAAACACTCTTCTCCCTCTTCATCTTCTTCTTCGCCCTTCTCTTCCTTTCTCTTGCTCTCACACCCTCAATTCCACCGCCACTTCCCTCTATACGATTGCACACTCGGCACGTGGCGCAACATCTCTCTCTCGCTCTCTGATTCTTCACTACAGTCTTTCCCTTCCCTCACCACTCTTGTCTCCTCTGGGGGCCTCTTCTGCCTATCTGATTCACTATCATGCTCCTTGCTAGTGTGCAACCTTCTGGCAAAGTCTTCTAGAAAGATTCAGTACCCAAGTTTCTCTCTTCACTTGGAGCATCTCACTTTTGTCACAACCCCAACAGGGTACACCATATTTGTTCTCTGCTCTCAGGCTGCTTCAAACTGTGCGTTTGTTTATGACTCAAATGTTCGAACTTGGAAACAGTTTCACGGTTTTGGTCCGGTTCTCGGTGACAATCATCACCAACAAGGTGTTTTTTTCAAAGGGGGTATATATTTTGCTACCCCGGAACCGTTTTCTGTGGTGATATTTGATTTGGGGAGTGGAAGGTGGGAGAGACCCGTTGGAGGGCTACCTAGTCAGCTCACTTTTGTTCGATTGGTGAGTGATGGAGAGGGTAAATTGTATTTGGTTGGTGGGGTTGGGAACAACGGAATCTCAAGGAGCATCAAGTTGTGGGAATTGGGTGGAGATGGAAATTGGGTGGAAGTGCAAAGTTTGCCTGATCTTATGTGTAAGAAGTTTGTGTCTGTGTGTTACCATAACTATGAGCATGTTTATTGCTTTTGGCATGAAGGGATGATCTGCATTTGCTGCTACACGTGGCCAGAGATATTGTATTACTTGGTTTCTAGGAGGACTTGGCATTGGCTTCCCAGGTGCCCCTCTTTGCCTCTCAAATGTAGTTGTGGTTTCAAGTGGTTTTCTTTTGTTCCAAATCTGTATGCTTCAGTCTGA 1161 0.4608 MKKNTHIIMTHSPATPRSSTAAAAPPMDPKIWSKLPPEILEYILSFLPLKTFLNLRSTCKGFWSLIFSPSFISKHSSPSSSSSSPFSSFLLLSHPQFHRHFPLYDCTLGTWRNISLSLSDSSLQSFPSLTTLVSSGGLFCLSDSLSCSLLVCNLLAKSSRKIQYPSFSLHLEHLTFVTTPTGYTIFVLCSQAASNCAFVYDSNVRTWKQFHGFGPVLGDNHHQQGVFFKGGIYFATPEPFSVVIFDLGSGRWERPVGGLPSQLTFVRLVSDGEGKLYLVGGVGNNGISRSIKLWELGGDGNWVEVQSLPDLMCKKFVSVCYHNYEHVYCFWHEGMICICCYTWPEILYYLVSRRTWHWLPRCPSLPLKCSCGFKWFSFVPNLYASV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00828 386 SMART fbox_2 35 75 IPR001810 GO:0005515
Lapu8g00828 386 CDD F-box_SF 33 66 - -
Lapu8g00828 386 PANTHER BNACNNG10540D PROTEIN 11 385 - -
Lapu8g00828 386 SUPERFAMILY Galactose oxidase, central domain 85 364 IPR011043 -
Lapu8g00828 386 Pfam F-box domain 32 62 IPR001810 GO:0005515
Lapu8g00828 386 Gene3D - 178 377 IPR015915 GO:0005515
Lapu8g00828 386 FunFam F-box family protein 93 373 - -
Lapu8g00828 386 MobiDBLite consensus disorder prediction 1 23 - -
Lapu8g00828 386 ProSiteProfiles F-box domain profile. 29 75 IPR001810 GO:0005515
Lapu8g00828 386 SUPERFAMILY F-box domain 22 73 IPR036047 GO:0005515
Lapu8g00828 386 Gene3D - 31 74 - -
Lapu8g00828 386 FunFam F-box domain containing protein 20 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00828 Lapu-Chr8 26441095 26442725 Dispersed/Wgd