Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00826 ATGTTATCCCACTCCCACTTCCCCATTCATAAATCTTCGCTTTTCGCAACTCCCTTACCAGCCCCCTTTCTCTCCCTCATTAACCTCGCTCCGAACCTAACATCCAAACCCCAACCCGAACCTCCGCTTCCGATCCTAATCCCTCTCATGGGAACCGAGAGTTACACTTACCTGGGACGCAATTTCAGCCAACTCAGCATCAACGACGCTTCCTCTTCCTCCGCCTTCAGCGACTGCAACAGTGACAGATCTGGCGAATTCGCCACCGCTTCTTCGCAAACTCGCCGTTTCCTCATCACCTGCGCCACTGAAAACTCCGACGACTTGATCCGTCAACTCGTTGCCGATCTCCACTCTGCCTCCCTCGACGATCAGAAACAAGCCGCCATGGAAATCCGATTACTCGCCAAGAACAAGCCGGAGAATCGACTCAAAATCGCTAAAGCAGGAGCAATCAAACCGCTGATTTCTCTCATTTCCTCGCCGGACCTCCAACTCCAGGAATACGGCGTCACCGCGATTTTGAATCTCTCGCTCTGA 540 0.5278 MLSHSHFPIHKSSLFATPLPAPFLSLINLAPNLTSKPQPEPPLPILIPLMGTESYTYLGRNFSQLSINDASSSSAFSDCNSDRSGEFATASSQTRRFLITCATENSDDLIRQLVADLHSASLDDQKQAAMEIRLLAKNKPENRLKIAKAGAIKPLISLISSPDLQLQEYGVTAILNLSL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00826 179 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 150 179 IPR000225 GO:0005515
Lapu8g00826 179 Gene3D - 70 179 IPR011989 -
Lapu8g00826 179 SMART arm_5 139 179 IPR000225 GO:0005515
Lapu8g00826 179 Pfam Armadillo/beta-catenin-like repeat 140 178 IPR000225 GO:0005515
Lapu8g00826 179 PANTHER U BOX DOMAIN-CONTAINING 63 179 - -
Lapu8g00826 179 SUPERFAMILY ARM repeat 106 178 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00826 Lapu-Chr8 26420374 26422856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00826 91 179 U-box Gene Family AT2G23140 46.067 8.54e-16 72.4