Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00822 ATGTTGTGCGCTTGTTCCGGGGAGCAATTCAAATTTGAAGAGGCACCACAGTCACCTGAGTCCTTGGCAACAAGGGATTTCTCTGCAAGTGGCCTTTCTTCAAGGACTGGGGATTGGGAATCCAAATTTGACGAGACGCAAGTGGAAGAAGTTGAATCAACACTAAAAGAAACTCTCTCATTAAACTATGAGGAAGCTCGGGCTTTGTTGGGGAGGCTTGAATACCAAAGAGGGAACTTTGAGGCTGCCCTTCAAGTTTTTGAAGGTATAGACATAAGGGATTTGGCCCCACGGATGATCAGGGCTATAGCTGAAAGAACCAAGCAAAGAAAACCACGGTCCAAGGTGGATAATGTGCTTCCTAATGTAATGTCAATGCATTCAGTAAGCCTGCTTCTTGAGGCAATTTTGCTTAAATCCAAATCCTTAGAAGAACTTGGAAGATACACAGAGGCTGCAAAAGAGTGCAGAATTATTGTGGATACAGTTGAATCTGCTCTTCCTAAAGGAATGCCTGAGGGTATTGCTGAAGATTGCAAGTTGCAAGAAATGTTCCACAAAGCATTGGAGTTGCTTCCAAATCTATGGGTTAAGGCTGGTTTTCTAGACGAAGCTGTAACTGCATATCGGCGGGCTCTAATCAAGCCGTGGAATTTGGAGCCGTGGAGATTGGCCTGTGTACAAAAAGATTTAGCTACCACACTACTCTATGGTGGTGCTGAAGTAAACCTACCCTCTCAGTTGCAAGTTAGTGGTCTAACAACACCTATGAGTGGCACTGAAGAAGCCATACTTTTGCTGTTAATACTCTCAGGAAAGATGGCACTTCAGGAAATAGACTGGGACCCTGAAATAATGGATCATCTTACATTTTCACTTTCAGTTACTGGAATGTTTGAATCATTGGCCGATAACATAGAGAAGATCCTTCCAGGTGTTTATGATCGGGCAGAGAGGTGGTACTTTCTTGCTCTTTGTTACAGTGCAGCAGGACAGAATGAAGTAGCCTTGAACCTTTTGAGGAAAGCTTGTGGTAGTTCTGAAGCACAGCACAGACCCTATTTTCCCTCATTTTTGTTTGGTGCAAAGCTGTGTTCTCTATTTCCAAACCATGCTCATGAAGGCATTAAGTTTTCACAGGAAGCTATTGATCAAGCCAAGCATCAAAATGAGCATTTTCTGGGTCAGGGCCAAAAATTTCTCGGCACTTGCCAAGGGGCTGCAGCTAGAATATCTGTACTGGATTCTGAAAGAATTATATTTCAAAGAGAGTCTTTGAACTTTCTGAATGATGCTGCTGCTCTAAATGGAAATAATGATCCAGAAGTGATATTCAGCCTTGGATTGGAAAATGCAATCCAAAGAAATCTAAATGCAGCATATGACAATCTAATGATATACTCTGACATGATGGCTGGCAGCTCAAAAAGAGGTTGGCATTTGTTAGCACTCATAGTATCAGCACAACAGCGGTTTAAAGATGCGGAAACTATAGTTGATTTTGCTTTAGATGAGGCTGATAGTATAGACCAGTTAGAACTACTGAGACTGAAAGCTATACTTCAAATTACTCAGCAGCAACCCAAGCAAGCAATAGAGACCTACAGAATCTTGCTAGCAGTAATTGAATCACAAAAGGAGCATTGGCTTCGGGCTAAGGCATTCAGGCATGAGGCATTAGCACAACAGAAGTTGGAAATGGAAGTCTGGCAGGATTTGGCCGCCATTTATGTAGATCTTAGTTCCTTTTTAGATGCAAAAGCCTGTGTTGACAAGGCCCAGTTGATAGAGTTTTTTTCTCCTAGAAGTTGGCATATTACTGGGTTGCTGTTTGAATCTCGAACATTGCACAAGGAGGCCTTAGCTTCCTTCTCAGTGTCGTTGTCAATAGAATCGGATTACATTCCCAGTATCATTTCAGCTGCAAAATTGTTGCTTAAACCTGGCATGCGATCACTACCAATTGCAAGAAGCTTTTTAATGAATGCTTTGAGATTAGATCCCACAAATCATGATGCATGGTTTAATCTTGGACTAATTTCAAAAATGGAAGGTTCATTACAGCAAGCAGCAGATTGCTTTCAAGCCGCATATGAGCTGAAGCTCTCAGCTCCAGTGCAAAAATTTGAGCGACTGAGACAGAAAGAATTGTAA 2154 0.4201 MLCACSGEQFKFEEAPQSPESLATRDFSASGLSSRTGDWESKFDETQVEEVESTLKETLSLNYEEARALLGRLEYQRGNFEAALQVFEGIDIRDLAPRMIRAIAERTKQRKPRSKVDNVLPNVMSMHSVSLLLEAILLKSKSLEELGRYTEAAKECRIIVDTVESALPKGMPEGIAEDCKLQEMFHKALELLPNLWVKAGFLDEAVTAYRRALIKPWNLEPWRLACVQKDLATTLLYGGAEVNLPSQLQVSGLTTPMSGTEEAILLLLILSGKMALQEIDWDPEIMDHLTFSLSVTGMFESLADNIEKILPGVYDRAERWYFLALCYSAAGQNEVALNLLRKACGSSEAQHRPYFPSFLFGAKLCSLFPNHAHEGIKFSQEAIDQAKHQNEHFLGQGQKFLGTCQGAAARISVLDSERIIFQRESLNFLNDAAALNGNNDPEVIFSLGLENAIQRNLNAAYDNLMIYSDMMAGSSKRGWHLLALIVSAQQRFKDAETIVDFALDEADSIDQLELLRLKAILQITQQQPKQAIETYRILLAVIESQKEHWLRAKAFRHEALAQQKLEMEVWQDLAAIYVDLSSFLDAKACVDKAQLIEFFSPRSWHITGLLFESRTLHKEALASFSVSLSIESDYIPSIISAAKLLLKPGMRSLPIARSFLMNALRLDPTNHDAWFNLGLISKMEGSLQQAADCFQAAYELKLSAPVQKFERLRQKEL* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00822 717 Gene3D Tetratricopeptide repeat domain 540 708 IPR011990 GO:0005515
Lapu8g00822 717 MobiDBLite consensus disorder prediction 21 37 - -
Lapu8g00822 717 MobiDBLite consensus disorder prediction 14 38 - -
Lapu8g00822 717 ProSiteProfiles TPR repeat profile. 671 704 IPR019734 GO:0005515
Lapu8g00822 717 Gene3D Tetratricopeptide repeat domain 261 539 IPR011990 GO:0005515
Lapu8g00822 717 Gene3D Tetratricopeptide repeat domain 28 240 IPR011990 GO:0005515
Lapu8g00822 717 SUPERFAMILY TPR-like 507 700 IPR011990 GO:0005515
Lapu8g00822 717 PANTHER PROTEIN NPG1 1 710 IPR043376 -
Lapu8g00822 717 SMART tpr_5 512 545 IPR019734 GO:0005515
Lapu8g00822 717 SMART tpr_5 317 350 IPR019734 GO:0005515
Lapu8g00822 717 SMART tpr_5 601 634 IPR019734 GO:0005515
Lapu8g00822 717 SMART tpr_5 671 704 IPR019734 GO:0005515
Lapu8g00822 717 SUPERFAMILY TPR-like 65 354 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00822 Lapu-Chr8 26375552 26379746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00822 1 709 Calmodulin-binding Proteins AT1G27460 57.924 0.0 827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00822 8 26375552 26379746 Lapu8g00822 8 26375552 26379746 ECH
Lapu8g00822 8 26375552 26379746 Lapu9g02087 9 35655912 35659395 PCT