Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00817 ATGGCGAATCAAGGAAACGACGACGTTTCTTCTTCCTTCACCGATTTCCCGGAGGACATTCAGGTCTGCATCCTCTCCTTCCTCGCCCCATCGGAAATCGCCACCCTGGCCTGCACCTCCAAGCAATTGGGTTCTCTCTGCGCCCGTGACTCCAAGCTCTGGTTGAGTATGTGCCAGCGCAGGTGGGGTTCCAAGACCCGCATCACCCAATGGGGCAAAGCCAAGGGCACAATCTCCTACAAACACCTCTATAATACCCTCCACCACTGGGAGAATCTCCTCGGCTTCTGGCGCCGCAGCGGATCTGGAACCCCTTCGTTGCTCTTCTTCGAGTGGGGCCCCTCGTTTATCTCAGCTTCTAGGGTTTCTCCTTCCGAATCGCTCTCCTACGGTGTCATCAAAACGCCGTTCCTCTGGATGAGTCTCTCCGAGGAGGGTCAAGTCGTTACTTTTCTTGATCCTCGTGGAAAGCCCGATGTGGAACCCGGGATTCAGAGCGAATTGGTTGCGGTGGATGTTAATTTCATGGGAAAGACGCACCTTGTTGTGGAGGAGAAGCAGTTTAGGGGTTCTGTCAGTGATGATTGCGGAGAAGAGCTTGTGGAGAGTGGATCGCCGCCGGAGAAACTGATGGCGGAGATTTACCAGCATTTCGCGAACCGGCGCAGCCCCGGCGGGGACCGGTCCCGGAGGCAGCGGCGCAGGGAGAAGGAGAGGCTCGCCAGACGGAAGTGGGAGCCTCAGCATTTTGTGAAGATTTTGAATTGCTCGCCCACACCGGAGAGGCCCTTGCAGGGTCTCTGGAAGGGAATATGTGACGACACGGGTCTGACATTTTACCTAGTTTCGTATGATGATCTTGGTGGCATTTCCTGCCGGCAGATTGGGGATCCTCCTGAACGTTTTTCAGGGCATGCCCCAGTTTTCTGGACATCAAATGCTAGATTTTTGGAAGCTCCCTTTTCTGTTGAAGAAGAATCCTTATATGCCAGTCGGGTTCATCTTAGACCACTTCATCCGCCCAATGAAACTCTTGAACAGTTCCCTTTATCATATGGTGAACTGGTGAATCGAATTCAGCAGGTCCAATTGTCAGACAATGTGGTAAACAGAATTGTTCACATAAGCTCAAGTTATGATTTAGTTATTCCAAACCTTGCCGGGACAACAAATCCAAGGAGTGCAGAGGGAAGGATTTGGCAGTACCAGAATGGTACTTTTGGATTTGGATTCCTTTCGGATAATTTGGTTGTAGACTTGAAGCATATTGTACATAATGGTTGTATTGTCGATACTGTAAAATCTGCCGCTGATTGA 1317 0.5103 MANQGNDDVSSSFTDFPEDIQVCILSFLAPSEIATLACTSKQLGSLCARDSKLWLSMCQRRWGSKTRITQWGKAKGTISYKHLYNTLHHWENLLGFWRRSGSGTPSLLFFEWGPSFISASRVSPSESLSYGVIKTPFLWMSLSEEGQVVTFLDPRGKPDVEPGIQSELVAVDVNFMGKTHLVVEEKQFRGSVSDDCGEELVESGSPPEKLMAEIYQHFANRRSPGGDRSRRQRRREKERLARRKWEPQHFVKILNCSPTPERPLQGLWKGICDDTGLTFYLVSYDDLGGISCRQIGDPPERFSGHAPVFWTSNARFLEAPFSVEEESLYASRVHLRPLHPPNETLEQFPLSYGELVNRIQQVQLSDNVVNRIVHISSSYDLVIPNLAGTTNPRSAEGRIWQYQNGTFGFGFLSDNLVVDLKHIVHNGCIVDTVKSAAD* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00817 438 ProSiteProfiles F-box domain profile. 10 57 IPR001810 GO:0005515
Lapu8g00817 438 Gene3D - 5 94 - -
Lapu8g00817 438 PANTHER F-BOX ONLY PROTEIN 48-RELATED 12 262 IPR045118 GO:0019005|GO:0031146
Lapu8g00817 438 SUPERFAMILY F-box domain 10 91 IPR036047 GO:0005515
Lapu8g00817 438 Pfam F-box domain 14 51 IPR001810 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00817 8 88 Glycosyltransferase AT1G78280 34.940 7.69e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00817 8 26350815 26353168 Lapu8g00817 8 26350815 26353168 ECH