Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02436 ATGGCTACCGATGCTCGTGACTCGCGTCGCAAGCATCGCCGGTCATCCTCTCCGGAGGACGTGGACAGATCCTCGAAGCGCCACAAGCACCGCCACCACGGCCACCGCCACCGCCACCGCCACGGGAGCAAAAAGCGCGTCGAAGATACTGAATTCGATGATCGAACCATTGCTGCTGTTCCTTCTCCAACTCCGCATAGACATCTCCCGGAGGACGATGTGGAGGAAGGAGAGATCCTCGATGACGAAGCTCTCGACAGTGAGGCTGGAAAAAAAGAGACGGAATCTGATGTCGAACCTGGTGAAATCAAGGTGACTGGAGATCGAGATGTTCAATCTGATAATCAAAATTTGGAACACCTCACTGTAAATTCAGAAACTAATGAGGGCATCAGGGTTGATAAATTTATTAGTCCTGCAACCAACGCAGAAGATGGTGTCTCTCCTAATCGTTTAAGTGCTGAGACTCAAGATGGAAAGCATGCTCAAGCTAGTATAGATGATCTGGACAATGGTTATTTGAATCCTAAATCTTCCAGAGGGGATAAGTGGCGGAATGGGGAACTTGGACATTTTAAAGGGAATGAGAAACTGAAAGGTGACTTTGATTATGAAACACTGGAGGCTAATGTTAGAAAAACAAATTTCCATAGGAATTCGTCATCCGAAAGTGGTGGAGAAAAAGGTAGAATATTAGGAAGTTCTCCTTCTCATGGCAGATATAGAAGTCGATCAAGATCAATTGGTCATACAAGAGACAGGTCTCGTTCTCGTAGTATCATAGATGAATATGTTCATTCCAAGAGAAGGCGCTCTGACTATGACCATGATGAGGACAGAGTGAGGGCACGTGGAAGGGAGCATGGTCATAGAACTGTGGTAGATGATAGAGATAGGAGTAGGGATAGAGACTTGTACAGAGAAAAGAAACAAGAGGAAACAAGCAGGGGTAAGGAGATTGAGTGGGACCACAAAAGGGTAAAGGAACGTGAAAGGAGCCGTGAGAGGTATAGAAGGGATGTAGAAAAAGATAGGAGCCGGGAAAGGGAGGATAGGGACAGGAGACAAGAAAAGGAAAGAGATAGGAGCTGGGAGACAGTGTTTGAGAGGGATATGAGAAGGGAAAAGGAAAGAGATAGAAGTAGGGACAGAACAAGAGATGCCAAGAGAGATAGAGACCTGGAGAATGAAAGGGATGATAAGAATCGAGAAAGGGATAATATTAAGGAGAGGGAAAGGCGGGATGATAGATATAGGCACAAAGATAGAGACACTGCAAATGGTAAAGATAGACATCTGCGTCATGAAGAGGGTAATGACACTGGAGATAGATATAGAAAACATTCCAGACATGAAGAAAATGATTACCACTGGGAAAGAAAAAGAAATTCTGGTAATCATGTTAAGGTTTATACCTCGATGGGAAGTACTGCAGAAGTGGATGAAAGCAAACTAACAGGCAGTGAGGTTGAACCAGATGACTTAGAGGAGGATACATTGCATTTACCTGATCAAGAAGAGGAAGATCTCAACAGGATCAAAGAAGAGAGTAGAAGAAGAAGGGAAGCAATAATGGAGAAATACAAGAAGCAGCATCAGCAAGTAGAAGTGGTTGGAAATGAAGGAAAAGACAAGGATACAGATGTTCCTACTGAAATCTCTGAAGCGCACGATGGTAAGAATGATGATGCTGATTATGTGGAGCCATCATTTGCTGTTGGGAAATCTCCTGAAAATGTGAATGTTACTTCTAAGAAGATATCTCTTGCTGGAGGCCTGGGAGAGGGTACTCCAAAGAGTGAAAGGTCAGAGGACAAGTATTGTGATGATATATTTGGGGAGACACCAACGGGAGTTCGGAAATCAGGAAAAGGAGATGGTTTAATGATTGAAAGGGTTGGCCTACATGACAATTGGGATGATGCAGAGGGTTATTACAGCTATCGAATTGGTGAAGTACTTGATGGCCGATATGAAGTCACTGCTGCACACGGGAGGGGTGTCTTTTCAACAGTTGTTCGGGCAAAAAATCTCAAGATGGGAAATGGTGAGCCAGAGGAAGTAGCAATAAAAATAATTCGTAATAATGACACCATGTACAAGGCTGGCATGGATGAATTGGTCATATTGAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAGATACAGGAATCATCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATACGCAAAACAGCTCTTTATTGCCTTGAAGCATCTCCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAATATGTTGGTAAACGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGCAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCATATCTTGTGAGTCGTTTTTATCGTTCCCCGGAAATAATACTTGGGTTGTCATATGATCATCCATTGGATATTTGGTCTGTGGGCTGTTGTTTGTATGAGTTATATGTAGGTAAGGTTCTTTTCCCAGGGCTTACTAACAATGATATGCTACGACTTCACATGGAACTAAAGGGCCCTTTTCCAAAGAAGATGTTACGTAAGGGAGCATTTACTGAACAGCATTTTGATCAGGACCTGAATTTTCTTGCTACCGAGGAAGATCCTGTGACAAAAAAGACCATAAAGCGGCTGATTCTCAACATTAAGCCAAAAGATATTGGGACACTCATCACTGGCTCTCCTGGGGAGGATCCAAAAATGTTGGCCAACTTTAAGGATCTTCTGGAAAAAGTTTTTGTCTTGGATCCAGACAAGAGGTTGACAGTGTCACAAGCTCTGAACCACCCATTCATCACTGGCAAGTGA 2931 0.4292 MATDARDSRRKHRRSSSPEDVDRSSKRHKHRHHGHRHRHRHGSKKRVEDTEFDDRTIAAVPSPTPHRHLPEDDVEEGEILDDEALDSEAGKKETESDVEPGEIKVTGDRDVQSDNQNLEHLTVNSETNEGIRVDKFISPATNAEDGVSPNRLSAETQDGKHAQASIDDLDNGYLNPKSSRGDKWRNGELGHFKGNEKLKGDFDYETLEANVRKTNFHRNSSSESGGEKGRILGSSPSHGRYRSRSRSIGHTRDRSRSRSIIDEYVHSKRRRSDYDHDEDRVRARGREHGHRTVVDDRDRSRDRDLYREKKQEETSRGKEIEWDHKRVKERERSRERYRRDVEKDRSREREDRDRRQEKERDRSWETVFERDMRREKERDRSRDRTRDAKRDRDLENERDDKNRERDNIKERERRDDRYRHKDRDTANGKDRHLRHEEGNDTGDRYRKHSRHEENDYHWERKRNSGNHVKVYTSMGSTAEVDESKLTGSEVEPDDLEEDTLHLPDQEEEDLNRIKEESRRRREAIMEKYKKQHQQVEVVGNEGKDKDTDVPTEISEAHDGKNDDADYVEPSFAVGKSPENVNVTSKKISLAGGLGEGTPKSERSEDKYCDDIFGETPTGVRKSGKGDGLMIERVGLHDNWDDAEGYYSYRIGEVLDGRYEVTAAHGRGVFSTVVRAKNLKMGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFRYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRSPEIILGLSYDHPLDIWSVGCCLYELYVGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKKTIKRLILNIKPKDIGTLITGSPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGK* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02436 976 MobiDBLite consensus disorder prediction 26 43 - -
Lapu7g02436 976 SMART serkin_6 658 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02436 976 MobiDBLite consensus disorder prediction 181 212 - -
Lapu7g02436 976 ProSiteProfiles Protein kinase domain profile. 658 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02436 976 SUPERFAMILY Protein kinase-like (PK-like) 645 975 IPR011009 -
Lapu7g02436 976 MobiDBLite consensus disorder prediction 467 483 - -
Lapu7g02436 976 MobiDBLite consensus disorder prediction 137 517 - -
Lapu7g02436 976 FunFam Serine/threonine-protein kinase PRP4 homolog 718 974 - -
Lapu7g02436 976 Gene3D Transferase(Phosphotransferase) domain 1 718 974 - -
Lapu7g02436 976 CDD STKc_PRP4 657 973 IPR044092 GO:0004674|GO:0006468|GO:0045292
Lapu7g02436 976 FunFam serine/threonine-protein kinase PRP4 homolog 628 717 - -
Lapu7g02436 976 PANTHER DUAL SPECIFICITY PROTEIN KINASE 363 974 - -
Lapu7g02436 976 Gene3D Phosphorylase Kinase; domain 1 628 717 - -
Lapu7g02436 976 MobiDBLite consensus disorder prediction 143 160 - -
Lapu7g02436 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Lapu7g02436 976 MobiDBLite consensus disorder prediction 213 228 - -
Lapu7g02436 976 MobiDBLite consensus disorder prediction 539 564 - -
Lapu7g02436 976 MobiDBLite consensus disorder prediction 84 115 - -
Lapu7g02436 976 MobiDBLite consensus disorder prediction 246 466 - -
Lapu7g02436 976 MobiDBLite consensus disorder prediction 1 115 - -
Lapu7g02436 976 Coils Coil 391 414 - -
Lapu7g02436 976 MobiDBLite consensus disorder prediction 1 25 - -
Lapu7g02436 976 Pfam Protein kinase domain 660 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02436 Lapu-Chr7 40756058 40766715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02436 611 975 MAP Kinase Gene Family AT2G18170 29.737 6.53e-28 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lapu7g02436 Pkinase 6.5e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02436 7 40756058 40766715 Lapu7g02436 7 40756058 40766715 ECH