LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu7g02430	ATGCCTTCTTCTCATACTCTCCTACCTCTTCTCTGTCTCTCTTCCCTTCTACTTACTTGGTTTCTGTGTGTAGTTGCCCAAGAACCAATCCTTTCTAACAAAATTGGCCAGGGCTATCGTCTCATATCCATTAAAAATGCCCCTGATGGTACCCTTGTTGGGCTCCTCCAAGTTAAGCAGAAGAACAATATCTATGGCCCTGACATTCCCCTGTTACGATTATATGTGAAGCACGAGACTGAGAACCGTTTGAGGGTACACATCACTGACGCAGAGAAACAAAGGTGGGAGGTTCCTTACAACCTTTTGCCAAGGGAGCAACCACCGCGTGTGCAGCAAAACATTGAGTGGTCGAGGAAGAAGAAGAAGAAGAACCTAATATCATTGTCAGAGAACAATTACTCTGGCTCTGAGCTTGTCTTCAGTTACACTCCAGACCCGTTTAGTTTTGCGGTGAAAAGGAAGTCAAATGGGGATACTCTTTTTGACTCCAGTTCTGATGAGTTTAACACATTGGTCTTCAAGGACCAGTATTTGGAAATTTCTACCAAATTGCCCAGAGATGTTTCTCTGTATGGTTTGGGGGAGAACACACAGGCACACGGGATGAAGCTGTGCCCAAGTGACCCTTACACTTTGTATACCACTGATGTCTCAGCCATTAATCTCAACACTGATTTATACGGGGCACACCCTGTGTACATGGATCTCAGAAATGAAGGTGGCAAGCCTTATGCACATGGGGTTCTGTTGCTGAATAGCAATGGAATGGATGTGTTCTACAGAGGAACCTCTTTGACCTACAAGGTTATTGGAGGAGTGCTCGATTTTTACTTCTTTGCTGGACCCACGCCTCTGAGTGTTGTGGATCAGTATACTTCCTTAATTGGTAGACCAGCTCCAATGCCTTACTGGGCCTTTGGATTCCACCAATGCAGATGGGGCTATCATAATCTATCGGTAGTAGAAGATGTGGTCGACAACTACAAAAAGGCTAAAATCCCACTTGATGTGATATGGAATGATGATGATCACATGGATGGCCACAAAGACTTCACTCTCAATCCAATTAACTACCCTCATTCCAAACTTTTAGACTTCCTGGACAAAATACACAGTATTGGCATGAAATACATTGTAATCATTGATCCAGGAATTGCTGTTAACTCCAGTTATGGTGTATATCAAAGGGGTATGGCTAATGACGTTTTTATCAAGTATGAAGGTGAACCCTTCTTGGCTCAAGTTTGGCCAGGAGCAGTATATTTTCCTGATTTTCTCAATCCAAAAACAGTTTCATGGTGGGTTGATGAGATCCGTCGCTTCCATGAACTAGTCCCTGTTGATGGCCTATGGATTGACATGAACGAAGCTTCAAATTTCTGCTCAGGAAAGTGCACAATTCCTAAAGGAAAAGTGTGCCCGAGTGGAACAGGACCCGGGTGGATTTGTTGCTTAGATTGCAAAAACATCACAAGCACAAGGTGGGATGAACCTCCCTACAAAATTAACGCCTCAGGAGTACAGGCTCCTATAGGCTTCAAAACCATAGCCACTAGTGCAGTTCACTATAACGGTGCTTTGGAGTATGATGCTCACAGCATCTATGGTTTCTCTCAGTCTATTGCAACTCACAAGGCCCTTCAAGGGCTTCAAGGAAAAAGGCCTTTCATATTGTCCCGCTCCACTTATGTGGGTTCAGGCAAATATGCTGCACATTGGACCGGTGACAATAAGGGCACATGGGAGGACTTAAGGTACTCGATATCCACAATGCTCAATTTTGGAATATTTGGGGTGCCAATGGTTGGTTCAGACATATGTGGTTTCTATCCAGCACCCACTGAAGAGCTTTGCAATAGGTGGATTGAAGTTGGTGCCTTCTACCCTTTCTCCAGAGACCATGCAAACTACTACTCCCCTAGACAGGAGCTTTACCAATGGGAATCAGTAGCCGAGTCTGCTAGAAATGCTTTAGGTATGAGGTATAAGCTCCTCCCTTATCTATACACCTTGAACTATGAGGCACATACTAGTGGAGCACCAATTGCAAGGCCTCTTTTCTTCTCATTTCCAACTTACACTGAATGTTATGGCCTCGACACTCAGTTCTTACTGGGGAGCAGTCTAATGATTTCTCCTGTGCTTGAGCAAGGAAAAACGCAAGTTAAAGCACTTTTCCCTCCTGGAACGTGGTACAGTTTGTTCGATTTAACGCAGACAATTGTATCAAAAGATGGGAACTATATTACCCTTGATGCACCTTTGCATGTGGTCAATGTGCATGTGTATCAGAATACCATTCTTCCAATGCAACAGGGTGGAATGATATCTAAGGATGCTAGAATGACACCCTTCAGCCTAATTGTAACCTTCCCTGCAGGTGCAACTGATGGAGTAGCCAAAGGGAAGCTATTCCTTGATGATGATGAGCTTCCAGAAATGAAACTTGGAAGTGGCTATTCAACCTACATTGATTTCCATGCAACTGTCAAAGAAGGAAACGTGAAAGTTTGGTCAGAAGTCCAAGAGGGCAAGTTTGCTCTAGATGAAGGGTGGATTATTGACACAATAAAAGTGTTGGGATTAAACAGAAATGGAACACTAAGTAGAATTGAGATTGATGGAGAACCACAGATGAACATCTCAAATGTGGAAGTCAGTACAAGTCAACAAAATTACTTGTTTAGACAGGGAGATGGAGATAAGATATTGATGGTAGGATTGAAGGGATTGAATATCCCTGTAGGTAAAAATTTTGCTGTGACCTGGAAGATGGGATCATAA	2787	0.4338	MPSSHTLLPLLCLSSLLLTWFLCVVAQEPILSNKIGQGYRLISIKNAPDGTLVGLLQVKQKNNIYGPDIPLLRLYVKHETENRLRVHITDAEKQRWEVPYNLLPREQPPRVQQNIEWSRKKKKKNLISLSENNYSGSELVFSYTPDPFSFAVKRKSNGDTLFDSSSDEFNTLVFKDQYLEISTKLPRDVSLYGLGENTQAHGMKLCPSDPYTLYTTDVSAINLNTDLYGAHPVYMDLRNEGGKPYAHGVLLLNSNGMDVFYRGTSLTYKVIGGVLDFYFFAGPTPLSVVDQYTSLIGRPAPMPYWAFGFHQCRWGYHNLSVVEDVVDNYKKAKIPLDVIWNDDDHMDGHKDFTLNPINYPHSKLLDFLDKIHSIGMKYIVIIDPGIAVNSSYGVYQRGMANDVFIKYEGEPFLAQVWPGAVYFPDFLNPKTVSWWVDEIRRFHELVPVDGLWIDMNEASNFCSGKCTIPKGKVCPSGTGPGWICCLDCKNITSTRWDEPPYKINASGVQAPIGFKTIATSAVHYNGALEYDAHSIYGFSQSIATHKALQGLQGKRPFILSRSTYVGSGKYAAHWTGDNKGTWEDLRYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPYLYTLNYEAHTSGAPIARPLFFSFPTYTECYGLDTQFLLGSSLMISPVLEQGKTQVKALFPPGTWYSLFDLTQTIVSKDGNYITLDAPLHVVNVHVYQNTILPMQQGGMISKDARMTPFSLIVTFPAGATDGVAKGKLFLDDDELPEMKLGSGYSTYIDFHATVKEGNVKVWSEVQEGKFALDEGWIIDTIKVLGLNRNGTLSRIEIDGEPQMNISNVEVSTSQQNYLFRQGDGDKILMVGLKGLNIPVGKNFAVTWKMGS*	929

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu7g02430	928	Gene3D	Glycosidases	299	664	-	-
	Lapu7g02430	928	Gene3D	-	665	764	IPR013780	-
	Lapu7g02430	928	Pfam	Glycosyl hydrolases family 31	278	769	IPR000322	GO:0004553\|GO:0005975
	Lapu7g02430	928	SUPERFAMILY	(Trans)glycosidases	288	680	IPR017853	-
	Lapu7g02430	928	Gene3D	glycosyl hydrolase (family 31)	32	298	-	-
	Lapu7g02430	928	Pfam	Galactose mutarotase-like	190	257	IPR025887	-
	Lapu7g02430	928	FunFam	Alpha-glucosidase 1	665	765	-	-
	Lapu7g02430	928	FunFam	Alpha-glucosidase 1	32	298	-	-
	Lapu7g02430	928	SUPERFAMILY	Galactose mutarotase-like	35	285	IPR011013	GO:0003824\|GO:0005975\|GO:0030246
	Lapu7g02430	928	PANTHER	ALPHA-GLUCOSIDASE	42	883	-	-
	Lapu7g02430	928	FunFam	Maltase-glucoamylase, intestinal	299	664	-	-
	Lapu7g02430	928	CDD	GH31_N	179	297	-	-
	Lapu7g02430	928	Gene3D	-	767	928	IPR013780	-
	Lapu7g02430	928	ProSitePatterns	Glycosyl hydrolases family 31 active site.	450	457	IPR030458	-
	Lapu7g02430	928	Pfam	N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase	55	186	IPR031727	-
	Lapu7g02430	928	SUPERFAMILY	Glycosyl hydrolase domain	682	763	-	-
	Lapu7g02430	928	CDD	GH31_MGAM_SI_GAA	297	677	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu7g02430	Lapu-Chr7	40686711	40691398	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu7g02430	35	927	Glycoside Hydrolase	AT1G68560	75.084	0.0	1436

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu7g02430	7	40686711	40691398	Lapu7g02430	7	40686711	40691398	ECH