Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02421 ATGAGGCTTTCCACACTGCAACCCCAGCCGCAGCGCTGCCACTACCCGATAAAGCGCTCGCCCCGCATGGACGCCTCCTTCCACCGCCGCAAGGACAAGGTTGTCGTCATCATGGGCGCCACCGGTTCCGGCAAGTCCCGTCTCTCCATCGACCTTGCCACCCTCTTCCCCTTCTCCGAAATCATCAACTCCGACAAAATGCAAGTCTACCGCGGACTCGACATCACTACCAACAAGATCCCTCTCTCCCAGCGCCGCGGCGTCCCCCACCACCTCCTCGGAGACGTCGACCCCTCACTCCCGGAGTTCTCCCCCGCCGACTTCCGCCGCCGCGCCGGCCACCTCATCGACGACATCAGCCGCCGGGATAGCCTCCCCATCGTCGTCGGCGGCTCCAACTCCTTCGTCCACGCGCTTCTCGTCCAAGACTTCCACCCCGAGTTCAACGTCTTCCACCACCGCGAGGGGCTGGTATCCTCTGAGTTGAGGTACAGGTGTTGCTTCCTCTGGGTGGACATAGCTTTCCCTGTGCTATCGCAATACTTGTGCGACCGGGTCGACGACATGCTCCAATCCGGGATGGTCGACGAGTTGGCTCAGTTCTTCGACCCTGAGGCTTCGCGTCGAACCGGGTCCGGTCTGAGAAAAGCCATTGGGGTGCCCGAGTTCGACCGGTTTTTTAACAAGTACCCACCCTGGGCCGGCCCCGCGGGCCCGGGGGAGGATCCTCTGCGGGCGCGTGCGTACGAGGAAGCGGTGCGGGCGATCAAGGAGAACACGTGTGAGTTGGCGGAGCGTCAGATGGAGAAGATCGAACGGTTGAAGCGCGCCGGGTGGGACCTACGGAGGATCGACGCTACGGAATCGTTTCGGGTTGTGCTGACGTCAGGGTCCAACAACGGGTCCGATGTATGGGAGAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGATGGAGTAG 972 0.6163 MRLSTLQPQPQRCHYPIKRSPRMDASFHRRKDKVVVIMGATGSGKSRLSIDLATLFPFSEIINSDKMQVYRGLDITTNKIPLSQRRGVPHHLLGDVDPSLPEFSPADFRRRAGHLIDDISRRDSLPIVVGGSNSFVHALLVQDFHPEFNVFHHREGLVSSELRYRCCFLWVDIAFPVLSQYLCDRVDDMLQSGMVDELAQFFDPEASRRTGSGLRKAIGVPEFDRFFNKYPPWAGPAGPGEDPLRARAYEEAVRAIKENTCELAERQMEKIERLKRAGWDLRRIDATESFRVVLTSGSNNGSDVWERQVLEPSVKIVKRFLME* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02421 323 Gene3D - 31 321 IPR027417 -
Lapu7g02421 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 205 IPR027417 -
Lapu7g02421 323 Coils Coil 254 277 - -
Lapu7g02421 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 321 IPR039657 -
Lapu7g02421 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 175 281 - -
Lapu7g02421 323 Pfam IPP transferase 68 144 - -
Lapu7g02421 323 Pfam IPP transferase 160 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02421 Lapu-Chr7 40499506 40500664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02421 163 321 C2H2 Transcription Factor Family AT2G27760 30.387 1.60e-13 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02421 7 40499506 40500664 Lapu7g02421 7 40499506 40500664 ECH