Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02408 ATGGAAACCCAGCTTGACTACAAAACCAAAAGAGCAAACCCCACTTCCCCAACGAGCTTGAAGCTCTTTGGGTTCAGCGTCCATGAAGACATCGCCATGGAAGAAGAAGACGAGGTGGTCATGCATGATGACGTGGAAGACTCCACCACCAAGGCCTCTTCCACTTCCCCATCCGCCTCGCCGGACTCCGCCGGTGCCGTCTCCGGACCTCCGTCCTCCGGGGACCGGAAATACGAGTGCCAATACTGCTGCCGAGAGTTTGCAAATTCACAAGCACTTGGTGGGCACCAGAACGCGCACAAGAAAGAGCGTCAGCAACTGAAGCGTGCGCAGTTACAGGCCACGAGAAACGCCGCCGTTTCCTTCGTGCGAAACCCTATGATCTCCGCCTTCGCCCCACCGCCGCACCTGCTGGCTCCGCCGGGTTCCATGGTGGTCCCGGCGGCCCCTTGGGTGTACGTTCCGCCTCGTGCCGCGCCTCCTCCCTTCCACGTGTCAGTATCTCACGGTTGTGCGTTTCCGTCGGCGAATGGCCAAAACGGTTTGAGTAGTAATAATAACAGCAACGTTACCATAACGGGTGCGAAATCCGCGGGTGCAGGGATGTTTCCCTATGTTGGCGTTGTAGGTGATTCGCAATTAGCTTTGTCAACGGTGCAGGTGCAGGCCCGGGCCCACCACACCATGGTTGATGGGCCCTCTTTGAGTAGGTTCTCCAAAGGGGATGGTGGGCCCAAATTTGACGATGCATGGGGCTTGGACTTGCACCTTAGCCTTGCGCCAGCTGCGCCGTGA 795 0.5799 METQLDYKTKRANPTSPTSLKLFGFSVHEDIAMEEEDEVVMHDDVEDSTTKASSTSPSASPDSAGAVSGPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPMISAFAPPPHLLAPPGSMVVPAAPWVYVPPRAAPPPFHVSVSHGCAFPSANGQNGLSSNNNSNVTITGAKSAGAGMFPYVGVVGDSQLALSTVQVQARAHHTMVDGPSLSRFSKGDGGPKFDDAWGLDLHLSLAPAAP* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02408 264 Gene3D Classic Zinc Finger 61 125 - -
Lapu7g02408 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Lapu7g02408 264 PANTHER ZINC FINGER PROTEIN 5 11 263 IPR044299 GO:0010090
Lapu7g02408 264 MobiDBLite consensus disorder prediction 50 67 - -
Lapu7g02408 264 FunFam Zinc finger protein GIS3 66 128 - -
Lapu7g02408 264 SUPERFAMILY beta-beta-alpha zinc fingers 74 105 IPR036236 -
Lapu7g02408 264 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Lapu7g02408 264 MobiDBLite consensus disorder prediction 36 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02408 Lapu-Chr7 40343337 40344449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02408 4 263 C2H2 Transcription Factor Family AT1G68360 43.636 4.90e-53 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02408 7 40343337 40344449 Lapu7g02408 7 40343337 40344449 ECH