Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02381 ATGGATTCAAACACATCAAGCTTTCTTTTGAACTCTTCAACTTTGCACTCAGTTTTCTACCAAGATAAACAAGATGATGGCATAATTGATCTGGGTCTTAGTCTCGGAACTGTTCAACATGAAGCTTACCATTCTTCTAGCAACAGTATGGTGTATGATGGTGGCCTTATGGACTGGCCTCACTCCAATCTGAACCTCAAGAACTCAAGCACAATGCATGCTAGACCTGTCCACGAAAATTTCGATGAAGAGATAGAGGGGGTCCAGAGCAATGAGAGATGGGCGTATGTGAAGGTTAACATGGATGGAGTTACCATTGGTAGGAAAATTTGTGTGCTTGATCACCGTGGATACTCAAGCCTGGCACTTCAATTAGAAGACATGTTTGGAAACCAATCTGTTTCTGGATTACGATTGTTCCAATCGGGATCAGACTACTCATTGCTCTACAAGGACAGACAAGATAATTGGAGACCTGTCGGTGATGTACCTTGGAAGGAGTTTGTAGAATATGTGAAGCGGTTGAGGATTGCAAGAAAGAATGCAGGCATTGTCTCTTGA 561 0.426 MDSNTSSFLLNSSTLHSVFYQDKQDDGIIDLGLSLGTVQHEAYHSSSNSMVYDGGLMDWPHSNLNLKNSSTMHARPVHENFDEEIEGVQSNERWAYVKVNMDGVTIGRKICVLDHRGYSSLALQLEDMFGNQSVSGLRLFQSGSDYSLLYKDRQDNWRPVGDVPWKEFVEYVKRLRIARKNAGIVS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02381 186 ProSiteProfiles PB1 domain profile. 94 182 IPR000270 GO:0005515
Lapu7g02381 186 Pfam AUX/IAA family 60 180 IPR033389 -
Lapu7g02381 186 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 50 181 IPR003311 GO:0005634|GO:0006355
Lapu7g02381 186 SUPERFAMILY CAD & PB1 domains 94 177 - -
Lapu7g02381 186 Gene3D - 88 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02381 Lapu-Chr7 40080614 40081817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02381 84 180 B3 DNA Binding Superfamily AT1G34310 32.990 2.56e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Lapu7g02381 AUX_IAA 1.7e-22 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02381 7 40080614 40081817 Lapu7g02381 7 40080614 40081817 ECH