Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02375 ATGGAGAAGGTTTGTGAGTTCTGCACGGCCCCGAGGCCACTTGTTTACTGCAAGGCTGATGCAGCATATCTTTGTCTATCCTGTGATGCGAAGGTGCATTTGGCAAATGCTTTGTCCGGCCGGCACCTCCGGAACCTTGTCTGTAACTCATGTGGACACCATGTTGCTTATGTTCTATGCTTGGACCACAAAATGTTAATCTGTCGAGAATGTGATCAAAAGTTGCACAATGTTTCTTTATCACATCAGAAACGAGCTATCAGAAGTTTCATGGGTTGCCCTTCTGCTAAAGACTTTGCAGCACTCTGGGGATTTGAATTGAATGCCAGTCAGGATCAGTTTGATTCAGCTTCTTGTGTCTCTGCGGATTTGAATGTAGCACAAGTCTCAGGAAAGCCTGACACTCAAACTGGGGTCCCTTCACTGTTATCTGGGGCCAAACTTGACGAGGGATCGACCAGTCAACAAGGTCAGATACTGTACAATCATCAGAAGAGTCAAACTATTGTGCAGCAGATTATTGATCTAAAATGGCTTCAACAAAATGAGGAGATTGATTATTCTGCGAAGATCAGTAGGCTAAAAGAAAAAAAATTATCTCCTTCAGTATATCACACTCTTAAGAAATTGGACCAAAAGTTCAATGGGCAAGCACAAAATTCTCAGGATTTTGCTACTAATGCTCTGGAAAAAGACTGTCATATTGGGGAGCTGAATACCGAAACTTTGCCTTCTACTTTTTCTCAACTTGATAATTTATCTTCGTCTTCAATTATCGATCTTCCCTTGCATGGAGAATTGTTCTGGTCATGCAAAAGTTCACTTGGAAGTAATCAGTTGTGGTCCCAAAATATTCAAGACCTCGGGATATGTGAAGAACTTGTTTGTCTAGATGATTTTAACATTCCTGATGTTGACTTAACTTTCCAAAACTTTGATGAACTATTTGGAGGAGATCAGGATCCAATTAGAATACTATTTGATGATCAAGATGTCTCCTGCTCTTCTCTAGAGAAGGATAAGTCAGTCGACAAGTCAGATATTGACGATCCAAGTGCAATAGAGGATTCTTCGGCTGCTGCATCCATTACTCTCTCCCAATCTGATCATGAGAACAAGGATATGAACCGTCTCGGCCAGTTCTGTCCAAAAAGCATGGATCCTACGCATGCAATTCAACCATTTGATTCAACTATACCATTATCTGTTTTGAGATTCAATCCGGAAAGCAGTTTCACTGGCCATGAGGACAGTGTCCTTTCTCCCTACAGTGAAGGGAAGGCTTATTCAGGTAGTTAA 1299 0.4149 MEKVCEFCTAPRPLVYCKADAAYLCLSCDAKVHLANALSGRHLRNLVCNSCGHHVAYVLCLDHKMLICRECDQKLHNVSLSHQKRAIRSFMGCPSAKDFAALWGFELNASQDQFDSASCVSADLNVAQVSGKPDTQTGVPSLLSGAKLDEGSTSQQGQILYNHQKSQTIVQQIIDLKWLQQNEEIDYSAKISRLKEKKLSPSVYHTLKKLDQKFNGQAQNSQDFATNALEKDCHIGELNTETLPSTFSQLDNLSSSSIIDLPLHGELFWSCKSSLGSNQLWSQNIQDLGICEELVCLDDFNIPDVDLTFQNFDELFGGDQDPIRILFDDQDVSCSSLEKDKSVDKSDIDDPSAIEDSSAAASITLSQSDHENKDMNRLGQFCPKSMDPTHAIQPFDSTIPLSVLRFNPESSFTGHEDSVLSPYSEGKAYSGS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02375 432 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Lapu7g02375 432 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Lapu7g02375 432 MobiDBLite consensus disorder prediction 411 432 - -
Lapu7g02375 432 CDD Bbox1_BBX-like 4 44 - -
Lapu7g02375 432 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 384 - -
Lapu7g02375 432 MobiDBLite consensus disorder prediction 338 352 - -
Lapu7g02375 432 SMART bboxneu5 1 47 IPR000315 GO:0008270
Lapu7g02375 432 SMART bboxneu5 48 87 IPR000315 GO:0008270
Lapu7g02375 432 MobiDBLite consensus disorder prediction 374 393 - -
Lapu7g02375 432 MobiDBLite consensus disorder prediction 338 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02375 Lapu-Chr7 39978270 39983865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02375 1 323 C2C2-CO-like Transcription Factor Family AT1G68190 37.730 5.60e-63 205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02375 7 39978270 39983865 Lapu7g02375 7 39978270 39983865 ECH