Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02368 ATGCTCTCGGTTACGCAACCTTCGTGCATTCCTCAAACCCTAAAACCCTCCATTCTCCTTCCGCTTTCGGCCATGAAGGACCGCCGCACGCTGTCCTCCTATGGCTCTGTTTACATTCCGCCGCACCAGCGTTTACGCTCACTCGCCAATTTCAACGACTCACCCTCTCCGGTCTCCGCCAAACCCCAGGAAAACCCTACACAGGCCGTTACTACTCTGCAACCGTCGTTGACGGAACCAGTTCCCGATAAGGCACGTTCGCGCTTCGTGTCTGCTTATGACGACACCGTTTCCGAGGAAGGCTCCGACCGTGAATTCGAACCTCCCTCACTAGCGCGTGCTTCAAAATTTGATTATCCGAATGCTTCACTTAGTGATACTACTGACGAGTGGAAGCGGAAATTTACCATGTTCTTAAATGACAAGAATAAGCACGAGTTAATCTCGAGGGAGAAAAGGGATAGGCGTGATTTTGAGCGAATAGCAGTTATTGCAAGCAGAATGGGGTTGTATAGCCATGTGTATGCTAAGGTTGTTGTCTTCAGTAAGGTCCCACTTCCAAATTACAGATATGATTTGGATGATCGGAAGCCTCAGAGGGAGGTGAACTTGTCTATCACCACATTTACCCGTGTTAAGGCATATTTTGAGGAATATCTTAGCAAAAAATCCAGGATGAACAAAAGCTGTTTGGATTTGGCATCTGCAAGATCAAGCAGTAATGGCAGCATTGGTATGGATGAGGGGCTTTTTGAGCAACCTGAGCCACTAGCATCAAGTAAGGCTGTTATGGAGAAAATTGTCTGGCAGAGGAGCTTACAAATGCGTGATCAGCAGCAAGCTTGGCAGGAATCTTCTGAAGGAAGTAGAATACTAGAATTTCGCAGAAGTCTCCCAGCTTATAGAAAGAAAGAAGAAATATTATCAGTCATATCAAGGAATCAGGTAGTTATCATTTCAGGAGAAACAGGTTGTGGCAAGACAACACAAATTCCACAATTTATTTTAGAATCTGAGATAGAATCAGTTCGTGGAGCTGCTTGTAATATCATATGCACACAGCCAAGACGCATTTCAGCTATGTCAGTTTCTGAAAGAGTGGCCTTTGAGAGGGGAGAGAAATTGGGCGAATCTGTTGGATATAAAGTTCGACTTGAGGGTATGAAAGGAAGAGATACCCATCTTCTCTTTTGCACGACAGGCATTTTATTAAGAAGATTACTAGCTGATAGAAAGTTAAAAGGCATAACTCATGTTATTGTGGATGAAATTCATGAGCGTGGAATGAACGAAGATTTTCTGCTTATCATTCTTAAAGAACTCCTTCCTCGTCGGCCAGAACTGAAACTGATTTTGATGAGTGCTACCCTAGATGCAGAGCTCTTCTCTTCATACTTTAATGGGGCTCCAACTATGTTTATTCCGGGCTTCACATACCCCGTCAAAACTCATTTTTTGGAGAACATTCTTGAAATGACGGGCTACAGATTAACTCCTTATAATCAAATTGATGATTATGGTCAAGAAAAGATGTGGAAAATGAACAGACAGGTCCCAAGAAAGAGGAAAAGTCAAATTGCTTCTGCCGTAGAGGATGCAATTAGTGCTGCTGATTTCAAAGATTACAGCCCACATACACAGGAGTCTTTGTCATGTTGGAATCCTGACTGCATTGGTTTTAGTCTCATAGAATATATTTTATGCAATATATGTGAGGATAAAAGACCTGGTGCTGTTTTGGTTTTCATGACTGGATGGGATGATATAAGCTCTCTGAAGGAGAAGCTTCTGACACATACAGTCTTGGGAGATCCAAACCGTGTTCTGTTGCTTACATGTCATGGCTCAATGGCTAGCTCGGAGCAGAGATTAATATTTGAAGAGCCTGAGGATGGAGTGAGAAAAATAGTGCTAACAACAAATATTGCCGAAACTAGTATCACGATAAATGATGTTGTTTTTGTTCTTGACTGCGGAAAAGCAAAAGAAACATCATATGATGCACTGAATAACACACCTTGTCTGCTTCCTACATGGATTTCTAAGGTTTCTTCTCAACAAAGAAGAGGAAGAGCTGGTCGGGTACAACCAGGAGAGTGTTACCATCTCTATCCTAGATGTGTGTATGATGCATTTGTGGAGTATCAGTTGCCAGAAATTTTGAGAACACCTTTGCAATCCCTCTGTTTACAAATTAAAAGTTTAAGACTTGGAAGTATATCTGAGTTCTTGTCCAGAGCTTTGCAGTCTCCAGAGATACTTGCGGTACAAAATGCAATTGAATATTTAAAAATAATTGGAGCTTTGGATGAGGATGAGAATCTCACTATTCTAGGGCGCTATTTGACAATGCTTCCTATGGAACCCAAACTTGGCAAGATGCTAATATTAGGTGCTATTTTCAATTGCCTGGATCCCATATTAACTGTTGTTGCTGGGCTCAGCGTGAGAGATCCTTTTCTAACACCATTGGATAAAAAAGATCTTGCAGAGGCAGCGAAATCTCAATTCTGTGGTGCATATAGTGACCACCTTGCACTTGTAAGGGCATATGAAGGTTGGAAAGATGCTGAAATGGACCTGGGTGGATATGAATACTGCTGGAAAAATTTTCTTTCCTTGCAATCCATGAAAGCTATTGATGCTCTTCGAAGAGAGTTCATATGCTTGCTCAAGGATACCGGATTAGTTGATAGCAACACGGCCAGCTGCAATGCATGGAGCACTGATGTAAATCTTATCCGAGCAGTTATTTGCTATGGTCTATATCCTGGAATTGGTTCTATTGTGAATAATGATAAATCATTCTCTTTGAAAACAATGGAGGATGGTCAAGTGCTCCTATATTCGAACTCAGTGAATGCTCGGGAAACTAAAATTCCATATCCATGGCTAGTTTTCAATGAAAAGATAAAAGTGAACTCAGTTTTTCTCCGTGACTCAACGGCTGTGTCTGATTCAGTGGTGCTTCTGTTTGGTGGAAGCTTATTGAAAGGAGATGCTGATAATCACTTAAAAATGTTGGGAGGATATCTTGAGTTTTTTATGGATCCCAGTGTTGTTGAAATGTACCAGAGTATAAGGAGAGAACTTGATGCCTTCATTCAGAGCAAACTACTTTTTCCAAGAATGGGCGTACAGTGGTATCGTGATCTCCTATCTGCAGTAAGGCTGCTGATTTCGAATGACAAATGTGAAGGTAAATTTGTATTTGGTCGCCAGGTCCTTAAACCATCAAAGAAATCCATCATGATGGCCTCGCATCCAACCTTGGTTTCAAGGATTGAGAGTGGACCTGGGGGAGATAACTCTAAAAGTCAGCTCCAAACATTGCTTACGAGAGCAGGATGTGTAGCACCCGTCTACATGACTAAACAATTGAAGAACAATCAGTTTCAGGCTACAGTTGAATTCAGTGGAATGCAGATAATGGGTCAACCTTGTAACAATAAAAAGAGTGCAGAAAAAGATGCTGCAGCTGAGGCATTGCAGTGGCTGATGGGTGGAAAGCAAACAGGCAGGGAGTATATCAATCACGTGTCAATGTTAATTAAGAAAAGCAAGAAGGATCATAATTAA 3579 0.4174 MLSVTQPSCIPQTLKPSILLPLSAMKDRRTLSSYGSVYIPPHQRLRSLANFNDSPSPVSAKPQENPTQAVTTLQPSLTEPVPDKARSRFVSAYDDTVSEEGSDREFEPPSLARASKFDYPNASLSDTTDEWKRKFTMFLNDKNKHELISREKRDRRDFERIAVIASRMGLYSHVYAKVVVFSKVPLPNYRYDLDDRKPQREVNLSITTFTRVKAYFEEYLSKKSRMNKSCLDLASARSSSNGSIGMDEGLFEQPEPLASSKAVMEKIVWQRSLQMRDQQQAWQESSEGSRILEFRRSLPAYRKKEEILSVISRNQVVIISGETGCGKTTQIPQFILESEIESVRGAACNIICTQPRRISAMSVSERVAFERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRKLKGITHVIVDEIHERGMNEDFLLIILKELLPRRPELKLILMSATLDAELFSSYFNGAPTMFIPGFTYPVKTHFLENILEMTGYRLTPYNQIDDYGQEKMWKMNRQVPRKRKSQIASAVEDAISAADFKDYSPHTQESLSCWNPDCIGFSLIEYILCNICEDKRPGAVLVFMTGWDDISSLKEKLLTHTVLGDPNRVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLTTNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSSQQRRGRAGRVQPGECYHLYPRCVYDAFVEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDEDENLTILGRYLTMLPMEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALVRAYEGWKDAEMDLGGYEYCWKNFLSLQSMKAIDALRREFICLLKDTGLVDSNTASCNAWSTDVNLIRAVICYGLYPGIGSIVNNDKSFSLKTMEDGQVLLYSNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSLLKGDADNHLKMLGGYLEFFMDPSVVEMYQSIRRELDAFIQSKLLFPRMGVQWYRDLLSAVRLLISNDKCEGKFVFGRQVLKPSKKSIMMASHPTLVSRIESGPGGDNSKSQLQTLLTRAGCVAPVYMTKQLKNNQFQATVEFSGMQIMGQPCNNKKSAEKDAAAEALQWLMGGKQTGREYINHVSMLIKKSKKDHN* 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02368 1192 SUPERFAMILY dsRNA-binding domain-like 1099 1175 - -
Lapu7g02368 1192 SMART helicmild6 587 696 IPR001650 -
Lapu7g02368 1192 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 914 995 IPR011709 -
Lapu7g02368 1192 Pfam Double-stranded RNA binding motif 1105 1166 IPR014720 -
Lapu7g02368 1192 Gene3D - 256 476 IPR027417 -
Lapu7g02368 1192 MobiDBLite consensus disorder prediction 48 78 - -
Lapu7g02368 1192 FunFam Putative ATP-dependent RNA helicase DHX36 738 842 - -
Lapu7g02368 1192 CDD DEXHc_RHA-like 314 474 - -
Lapu7g02368 1192 Gene3D - 561 715 IPR027417 -
Lapu7g02368 1192 PANTHER ATP-DEPENDENT RNA HELICASE 252 1013 - -
Lapu7g02368 1192 FunFam DExH-box ATP-dependent RNA helicase DExH3 1082 1171 - -
Lapu7g02368 1192 SMART ultradead3 296 484 IPR014001 -
Lapu7g02368 1192 Pfam Helicase conserved C-terminal domain 564 695 IPR001650 -
Lapu7g02368 1192 CDD SF2_C_RHA 542 704 - -
Lapu7g02368 1192 SMART DRBM_3 1104 1167 IPR014720 -
Lapu7g02368 1192 FunFam DExH-box ATP-dependent RNA helicase DExH3 558 714 - -
Lapu7g02368 1192 SMART ha2_5 758 848 IPR007502 GO:0004386
Lapu7g02368 1192 MobiDBLite consensus disorder prediction 48 81 - -
Lapu7g02368 1192 Pfam DEAD/DEAH box helicase 305 458 IPR011545 GO:0003676|GO:0005524
Lapu7g02368 1192 Gene3D - 1080 1171 - -
Lapu7g02368 1192 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 562 736 IPR001650 -
Lapu7g02368 1192 Pfam Helicase associated domain (HA2) 759 832 IPR007502 GO:0004386
Lapu7g02368 1192 FunFam DExH-box ATP-dependent RNA helicase DExH3 252 476 - -
Lapu7g02368 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 305 861 IPR027417 -
Lapu7g02368 1192 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 308 475 IPR014001 -
Lapu7g02368 1192 Gene3D - 738 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02368 Lapu-Chr7 39883839 39896512 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02368 7 39883839 39896512 Lapu7g02368 7 39883839 39896512 ECH