Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02355 ATGGCGTCGCCGTCGTCCTCCACCGCGGCGTCCACCAACATCGTCCTCGCGATCTTCGAGAAGAAGACAAACACCGTCGATCTGTATCGCCCCCTCCGCAATTACGTGGCGTTTCACTACTCCGAGCGCGAAGCGCAGAACCTCGAAGACGATCTCCAAACCCTAAAGCAACTTCGCTCCGACCTCGAGCGTCACACCGATCCCTCCCTCCCGGCGCGCCGCGATCTCCTCCAAACCTATTTCAAATCTCTCTGCCTTGTTGAGACGCGCTTCCCGATCTCCCCCGACCCTGACCACGTCAACGCCCTCACCTTCGTCTGGTTCGATGCCTTCAAGCCCAAGCAGAAGGCCTCGCAGCAGAACATACACCTCGAGAAGGCCTCCGTGCTGTTTAATTTGGGCGCCGTTTACAGTCAGATTGGATGTTCGTATGATCGGAACACCGTTGACGGCCGCCGCCTGGCCTCGCATGCCTTCATTGCTGCTGCCGGTTCCTTTGCCTTCCTCCGCGACAACGCGTCCATGAAGGCATCCGTTGGGAATTCCACCACCGTTGATTTGTCCGTTGAGTGTGCCGGGATGCTGGAGAAGCTCATGCTCGCGCAGGCGCAAGAGTGCGTTTTCGAGAACACCATTGCTAAAGGGAGCACTCCCGGTGTCTGTGCCAAGATCTCCAGACAGGTTGGGATATATTACGAGGAAGCTTTAGCTGCACTGAATGTTGCACCTTTGAGCCAGCATTTTGAAAAGTCCTGGATAGTTCATGTACAGTTAAAGGCAGCACTGTTCTATGCAGAAGCTTGTTATAGGTTTGGATTGGAGCTGCATGATAAAGAGGAAATAGCAGAGGAGATTGCACGACTACGGAGTGCTGTTAATGTGTTGACTGAGGCAAAGAAGAGCTCTAAGGGTGCTGCAGTGCAAATTCTTGATGCAATTGGAAAGTTAGAGGCTAATATTAACCGGAACCTGGAAAGAGCTGTCAAGGAGAATGATAGGGTTTATCTCATGAGAGTTCCTTCAGCAAGTTCATTACCGCCTCTTCCAGCATTTTCTATGGTGAAGCCCATGGCAATGAATGAAGTGCTGGATGCAAGCAAAGAGAAGATGTTTGCGAGTCTTGTTCCGGACAGCAGTGCAAAGGCCCTCTCCAGGTATACTGAAATGGTAGATGACGTTATAAGAACACAGGCTGAAAAGTTGCAGCAAGCTAGTGAGCTAACCCGAGTTAGGCTTAAGGAAATGGAACTGCCAGATTCCATTCTTGCTTTGGAAGGAAATTTTACTCTTCCAACAAGTCTCAAAGAAGACGTGGAGGCTGTGCAGATCAGTGGGGGCCCTGCTGGTTTGGAAGCAGAGTTGCAGCAACTTAAGGACCTAAGGAGGGTGAATCAAGAGTTGCTGGTCCAGACTGAGGAATTGTTGCAGAAGGAAGCAAGAGAAGATTCACAATTTAGAAGTCAATTTGGCACAAAGTGGACCAGGCCCCAGTCAAGCACCTTGACTAAAAACTTGCAGGACAGGCTCAACAGGTTTGCAGGTAACTTGAAGCAAGCTGCTGAAAGTGATGCTAGGATTGAACGATCAGTGAGAGAACATTCAGCTCTCATGTCAATCCTTGATGCCCGTCCGATTGAATCTGCACTTCCGAGCTTGGCAAGGCCGATTATGTCTTTTGATCAAAATGAAGATGCTATTGTGGGGTCTCTTAAGCAAAGTTTGAGGCAACTAGAAACTCTAGGAGCTCAAAGGGCTGGACTTGAAGATATGCTTAAAGAGATGAAAAGAAAGGATGATATATTACCAAAGTTGATGACTTCCACCGGTTCTTATGATGATCTCTTCAAGAAGGAGATAGCAAAATATGATCATATTTGTGATGAAATAGCTCAAAATATTGAGGCACAAGAGCAATTGTTGCTGCAGATCCAGGCTCAAAATGATGAGTTCGCTGTTATCTTCAATCTTGAAGATTACAAAGCTTCACGTGAAAAAGCCTACAAGCAAATTGAAGCCTCCATAGCAAAATTTCGAGAAATAAAGGACAACATCAATGAAGGGTTAAAATTCTATGTTACCCTGCAGGATGCAATCACAAACGTAAAGCAGCAGAGCAACGACTTTGTAATGACAAGGAACATTCAGTGCAGGGAAATGATTGAAGATGTTCAGAGACAAGTGGCTGGTCTGAGTTTCCAGGATAACAAAAATACAGGTGCTTTTAATAGCAATTACCCATCAGTGGGAAGCCAAAATCAAAGAGCCAGTACACAAACAGATCCTCGTCCACAAGCACCTTATTATCAGCCAGTTGAGCAGCCACCAGTTCCTCCCTATGGCCATCACCCCCCTTCCCCATATGGTGGTCCTGCACATCATCAGCCTCCACCTCCATACCACATTCCACCATCATCAACTGCTCCATACCCACCCCCTCAGGTTCACCAGCAGCCACCCGCAAACCATGAGTATGGGCAGCCAGCATATCCCGGATGGCGTGGTCCGTACTATAATGCACAAGCACAGCAACCTGGTTCTGTACCACGGCCTCCTTACACTATTCCGTCTCCATATCCTCCGCCTCACCAAAGTGGCTACTATAAGCAGCAATAG 2613 0.4834 MASPSSSTAASTNIVLAIFEKKTNTVDLYRPLRNYVAFHYSEREAQNLEDDLQTLKQLRSDLERHTDPSLPARRDLLQTYFKSLCLVETRFPISPDPDHVNALTFVWFDAFKPKQKASQQNIHLEKASVLFNLGAVYSQIGCSYDRNTVDGRRLASHAFIAAAGSFAFLRDNASMKASVGNSTTVDLSVECAGMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQVGIYYEEALAALNVAPLSQHFEKSWIVHVQLKAALFYAEACYRFGLELHDKEEIAEEIARLRSAVNVLTEAKKSSKGAAVQILDAIGKLEANINRNLERAVKENDRVYLMRVPSASSLPPLPAFSMVKPMAMNEVLDASKEKMFASLVPDSSAKALSRYTEMVDDVIRTQAEKLQQASELTRVRLKEMELPDSILALEGNFTLPTSLKEDVEAVQISGGPAGLEAELQQLKDLRRVNQELLVQTEELLQKEAREDSQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVREHSALMSILDARPIESALPSLARPIMSFDQNEDAIVGSLKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFKKEIAKYDHICDEIAQNIEAQEQLLLQIQAQNDEFAVIFNLEDYKASREKAYKQIEASIAKFREIKDNINEGLKFYVTLQDAITNVKQQSNDFVMTRNIQCREMIEDVQRQVAGLSFQDNKNTGAFNSNYPSVGSQNQRASTQTDPRPQAPYYQPVEQPPVPPYGHHPPSPYGGPAHHQPPPPYHIPPSSTAPYPPPQVHQQPPANHEYGQPAYPGWRGPYYNAQAQQPGSVPRPPYTIPSPYPPPHQSGYYKQQ* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02355 870 Coils Coil 278 298 - -
Lapu7g02355 870 Pfam BRO1-like domain 16 393 IPR004328 -
Lapu7g02355 870 Gene3D alix/aip1 like domains 10 375 IPR038499 -
Lapu7g02355 870 PANTHER PCD6 INTERACTING PROTEIN-RELATED 16 868 - -
Lapu7g02355 870 Coils Coil 450 477 - -
Lapu7g02355 870 ProSiteProfiles BRO1 domain profile. 14 408 IPR004328 -
Lapu7g02355 870 SMART BRO1_2 14 398 IPR004328 -
Lapu7g02355 870 Pfam ALIX V-shaped domain binding to HIV 430 714 IPR025304 GO:0005515
Lapu7g02355 870 Coils Coil 577 597 - -
Lapu7g02355 870 Coils Coil 626 646 - -
Lapu7g02355 870 CDD BRO1_Alix_like_1 15 370 - -
Lapu7g02355 870 CDD V_Alix_like_1 376 712 - -
Lapu7g02355 870 MobiDBLite consensus disorder prediction 848 862 - -
Lapu7g02355 870 Coils Coil 38 65 - -
Lapu7g02355 870 MobiDBLite consensus disorder prediction 734 870 - -
Lapu7g02355 870 MobiDBLite consensus disorder prediction 767 817 - -
Lapu7g02355 870 MobiDBLite consensus disorder prediction 734 764 - -
Lapu7g02355 870 Gene3D alix/aip1 in complex with the ypdl late domain 376 654 - -
Lapu7g02355 870 Gene3D alix/aip1 like domains 422 703 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02355 7 39755812 39765473 Lapu7g02355 7 39755812 39765473 ECH