Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02354 ATGAGCAATCCCAACGAAGAAGAACTGTTATCTAGAGCTGCAAGAGCAGCAGAAGATCTTTACCATCTTCGGGACACTTATTTTCCACCCAACCCTGATGACAGAATCTCAAAGTTGCAGCACGAATCCGATCTCGCTCTCAGTCTCCTCGATTCTATTCCCCCAGAACAAAGAAAATCACCTACGCAACGTGCAACATTTGAATATCTTAGAGGGAAGATGTTGGATGTATTTCCTGACTATAGGAAAGAAGCTGAGGATCATCTATCGAAAGCTGTTAAGTTAAACCCATCTCTTGCAGATGCTTGGCTATGTTTAGGAAATTGCATTTGGAAAAAGGGAGATTTAACTGCTGCAAAGAATTGCCTTAGTCTTGCATTAGACAAGGGTCCTAACAAAAAGATTCTTTGTCAACTATCGATGCTTAAAAGAAAAATGTCTCAAGGTGTGGAGAATCAAGCAGAACTGGTTGAGGAAAGCATTCAACATGCCAAGGAAGCAATCACTTTGGATGTCAGGGATGGGAGCTCTTGGTATAATCTTGGAAATGCTTGCCTTACAAGTTTTTTTGTCACTGGAGCTTGGGATCATACCAAACTTTTACATTCTTTAAAAGCATATCAAAATGCTGAGAAAGATGAAAGAATGAAGTCCAATCCAGATTTATATTTTAATAGTGCTACGGTTTACAAATATCTTGAGAACTACCAGAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTTAAAGGATCCAGGTCTCAATGCTGCAGAGGAGGTTCAGAAGATAGTCAGTTTACTTGACAAGGTGGACAATCTTTTGAAGTTTTGTTATGCACAGGGACATGTAAGAGCCAAGCGAATGACATCTCTGGCTTCATCATTGGTCGCTGTTGATTTGAAATCACCATACAGAAGAGTTACCATAGACCTTCTATCAGAGGGTTCAAATAGAGCTCTTGCAGTAGAGGGTAAAGTTTTTTTCTTTGTTAGGACTGAAGGTGTTGCTCCGCTATACTATTTGCTTTGTGATTCAAATCAATCCTGCTTTGTTCTCTCGATTTATGGTGTACGTACTGATGTGATTAAAGAAGGAGATCAGCTAACAATACTTGATCCTTATTTTCGTGATGTTGATTTGTCGTGGAATGAGAAGCATTACCAGTTCAAGTCTATACGTCTGGATTTCTATGAGCAAGTGCTTGTAAATGGAAAAGCTTTGACTCCTCAACAAGCTGTTCGTACGTCAATATATGCTCAACATAAACCCTGA 1269 0.3995 MSNPNEEELLSRAARAAEDLYHLRDTYFPPNPDDRISKLQHESDLALSLLDSIPPEQRKSPTQRATFEYLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLTAAKNCLSLALDKGPNKKILCQLSMLKRKMSQGVENQAELVEESIQHAKEAITLDVRDGSSWYNLGNACLTSFFVTGAWDHTKLLHSLKAYQNAEKDERMKSNPDLYFNSATVYKYLENYQRALSGFEAAALKDPGLNAAEEVQKIVSLLDKVDNLLKFCYAQGHVRAKRMTSLASSLVAVDLKSPYRRVTIDLLSEGSNRALAVEGKVFFFVRTEGVAPLYYLLCDSNQSCFVLSIYGVRTDVIKEGDQLTILDPYFRDVDLSWNEKHYQFKSIRLDFYEQVLVNGKALTPQQAVRTSIYAQHKP* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02354 422 SMART tpr_5 220 253 IPR019734 GO:0005515
Lapu7g02354 422 SMART tpr_5 100 133 IPR019734 GO:0005515
Lapu7g02354 422 SUPERFAMILY TPR-like 72 244 IPR011990 GO:0005515
Lapu7g02354 422 Coils Coil 147 167 - -
Lapu7g02354 422 ProSiteProfiles TPR repeat profile. 220 253 IPR019734 GO:0005515
Lapu7g02354 422 Pfam Tetratricopeptide repeat protein 5 OB fold domain 303 414 IPR032076 -
Lapu7g02354 422 Gene3D Tetratricopeptide repeat domain 2 275 IPR011990 GO:0005515
Lapu7g02354 422 Gene3D - 281 421 IPR038645 -
Lapu7g02354 422 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 18 287 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02354 7 39741687 39752685 Lapu7g02354 7 39741687 39752685 ECH