Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01747 ATGGCACTCTCGCGCCTTCACCACCCTCTCTTCTCTCGCTCCCTTCGCATCCTCTCTTCTTCCACCAGATCCCTCTCTCGAACTTATAATTCAACGATTTTTGCCGTGGGAGCTGATACGAATATAAGGTCCTCGTCTTGCTCAGGGATTACTAGAATTCGTGATAGATCTTTGAAATCAAAGTGGACTGACGTCAAATGCTTTTCATCTTCAGATTCTTCACATGAAGTCCTTGGGATGCCTGCTTTATCTCCTACAATGACGCAAGGTAATATTGCAAAATGGAGGAAGAAAGAAGGAGAAAAGATAGAAGTGGGGGATGTACTATGTGAAATTGAAACTGACAAAGCTACACTAGAATTTGAAAGTCTTGAAGAGGGATTTCTGGCTAAGATATTGGTACCTGAAGGTTCAAAGGATGTGCCTGTTGGACAACCAATTGCTATAACAGTTGAGGACGAACAGGACATCCAAAATGTTCCTGCTTCTGTGGGGGGTGAGACAGGGGTTGAAGAAACGAAACCAGCTAAGCAGGATGCAGATGAGGGGAAACCAGAATCAGCTTCTACTATGATTAATGCATCAGAACTTCCTCCTCATGTCCTTCTTGAAATGCCAGCTTTGTCTCCGACGATGAACCAAGGTAACATTGCTAAATGGAGGAAACAAGAAGGAGACAAGATTGAAGTGGGTGATATATTATGTGAGATAGAGACAGACAAAGCTACACTTGAATTTGAAACTCTTGAAGAGGGGTACCTGGCTAAGATACTTGCTCCAGAAGGTTCGAAAGAAGTGGCAGTTGGGCACCCTATTGCAATAACAGTTGAAGATGCAAGTGACATTGAAGCTATAAAGAATTCTGTTAGCAGTAGTTCAAGAAACCAACAGAAGGCCCCCCAACATGACACTAAAAGTGAGGTCAAAGCTCAAAAAAACAAAATAACTCGAATCAGCCCAGCTGCGAAGTTGCTAATTGCAGAGTATGGATTGGATGCATCAACATTGAATGCAACTGGTCCTTACGGCACCCTACTGAAAGGGGATGTTCTTTCTGAAATTAAGTCAGGAAAATTGTCTCCAAAACCTGCTTCATCTAAAGAAAAGGTGCTATCATCTCAAAGTCATCAACAAGTTGCAGCTTCTCAAGAATCAAAGTCTGACTTAAAGCAGTCAGATGCCTATGAAGATTTTCCTAATAGTCAAATTCGCAAGGTGATAGCCAAGAGATTATTAGAATCAAAACAAAATACACCACACTTATATTTATCATCAGATGTTGTACTGGATCCTCTTCTTTCTCTTCGGAAGGATCTTAAAGAGCAGTATGACGTTAAAGTTTCTGTGAATGACATTATTATCAAAGTTGTAGCTGCTGCTCTCAGAAATGTACCTGAAGCAAACGCATACTGGAATGTTGAGAAGGGTGAGGTCATTTTAAATGATTCTATTGATATATCCATAGCGGTTGCCACGGATAAGGGCTTGATGACTCCGATAATAAAAAACGCTGATCAGAAGACGATCTCAGCCATCTCTGCAGAGGTCAAGGAACTAGCTGCAAAGGCACGTGATGGCAAGTTGAAGCCACAGGAATTCCAAGGGGGGACTTTTAGCATTTCAAACTTAGGAATGTTTCCTGTGGATAAATTTTGCGCTATTATAAACCCCCCTCAGGCCTGCATTCTTGCTGTTGGGAGAGGCAACAAAGTTGTGGAACCTGCAATTGGAGATGATGGAGTTGAGAAGCCATCTATTGTCACTAAGTTGAGCTTAACTTTGTCTGCTGATCATCGTGTTTTTGATGGCAAGGTTGGAGGTGCATTTCTCTCAGTGCTGCAATCAAACTTCAGTGATATAAGACGACTTCTTTTATAA 1878 0.418 MALSRLHHPLFSRSLRILSSSTRSLSRTYNSTIFAVGADTNIRSSSCSGITRIRDRSLKSKWTDVKCFSSSDSSHEVLGMPALSPTMTQGNIAKWRKKEGEKIEVGDVLCEIETDKATLEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDEQDIQNVPASVGGETGVEETKPAKQDADEGKPESASTMINASELPPHVLLEMPALSPTMNQGNIAKWRKQEGDKIEVGDILCEIETDKATLEFETLEEGYLAKILAPEGSKEVAVGHPIAITVEDASDIEAIKNSVSSSSRNQQKAPQHDTKSEVKAQKNKITRISPAAKLLIAEYGLDASTLNATGPYGTLLKGDVLSEIKSGKLSPKPASSKEKVLSSQSHQQVAASQESKSDLKQSDAYEDFPNSQIRKVIAKRLLESKQNTPHLYLSSDVVLDPLLSLRKDLKEQYDVKVSVNDIIIKVVAAALRNVPEANAYWNVEKGEVILNDSIDISIAVATDKGLMTPIIKNADQKTISAISAEVKELAAKARDGKLKPQEFQGGTFSISNLGMFPVDKFCAIINPPQACILAVGRGNKVVEPAIGDDGVEKPSIVTKLSLTLSADHRVFDGKVGGAFLSVLQSNFSDIRRLLL* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01747 625 ProSiteProfiles Biotinyl/lipoyl domain profile. 75 151 IPR000089 -
Lapu7g01747 625 MobiDBLite consensus disorder prediction 366 394 - -
Lapu7g01747 625 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 71 176 - -
Lapu7g01747 625 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 100 129 IPR003016 -
Lapu7g01747 625 SUPERFAMILY Single hybrid motif 201 293 IPR011053 -
Lapu7g01747 625 ProSiteProfiles Biotinyl/lipoyl domain profile. 200 276 IPR000089 -
Lapu7g01747 625 MobiDBLite consensus disorder prediction 288 313 - -
Lapu7g01747 625 SUPERFAMILY CoA-dependent acyltransferases 389 625 - -
Lapu7g01747 625 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 198 625 IPR045257 GO:0006086|GO:0045254
Lapu7g01747 625 Pfam e3 binding domain 317 351 IPR004167 GO:0016746
Lapu7g01747 625 MobiDBLite consensus disorder prediction 161 188 - -
Lapu7g01747 625 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 395 624 IPR001078 GO:0016746
Lapu7g01747 625 Gene3D - 379 625 IPR023213 -
Lapu7g01747 625 MobiDBLite consensus disorder prediction 357 394 - -
Lapu7g01747 625 Pfam Biotin-requiring enzyme 203 274 IPR000089 -
Lapu7g01747 625 Pfam Biotin-requiring enzyme 78 149 IPR000089 -
Lapu7g01747 625 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 310 355 IPR036625 GO:0016746
Lapu7g01747 625 CDD lipoyl_domain 205 274 - -
Lapu7g01747 625 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 225 254 IPR003016 -
Lapu7g01747 625 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 196 300 - -
Lapu7g01747 625 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 317 354 IPR004167 GO:0016746
Lapu7g01747 625 CDD lipoyl_domain 80 149 - -
Lapu7g01747 625 Gene3D - 69 173 - -
Lapu7g01747 625 Gene3D - 198 301 - -
Lapu7g01747 625 Gene3D - 317 358 IPR036625 GO:0016746
Lapu7g01747 625 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 380 623 - -
Lapu7g01747 625 SUPERFAMILY Single hybrid motif 78 164 IPR011053 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01747 Lapu-Chr7 33080699 33094542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01747 186 625 Acyl Lipid Metabolism Gene Families AT1G54220 40.000 2.20e-105 327
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01747 7 33080699 33094542 Lapu7g01747 7 33080699 33094542 ECH