Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01550 ATGGCAGATCAAACCCGGGATTCAGGAACTGTATCCGTTGAAGCTTCACAAGAAAGAGGAAGGAAACTCCCAAACTTTCTGCTATCTGTGAGACTTAAGTATGTCAAGCTTGGATACCACTATCTGATCTCCAATGCTATGTACCTTTTGCTCATACCCCTTATTGGGGTAGCTTCTGCTCATCTGTCAACTATCTCTTACCAAGATGTTGCACAACTATGGGAAAACCTAAAGTTCAATCTTGTCTGGGTGACTGCATGTTCTAGTCTTATAGTGTTCCTTGTCACCTTTTACTTCATGAGCCGTCCTAGAGGTGTTTACTTGGTGGATTTTGCATGTTACAAGCCAGAGCAAGACTGCACTTGCACAAGGGAGATTTTCATGGACAGGTCTATGAAAACCGGGGTGTTTTCAGAGGAGAACTTGGCCTTTCAGAAGAAGATACTTGAGAGGTCAGGTTTGGGACAGAAGACTTACTTGCCTCCAGCAATCTTGAGTATCCCACCAAACCCGTGTATGGCTGAAGCAAGGAAAGAAGCGGAGCAAGTAATGTTTGGAGCTATTGACCAGCTTCTGGCAAAAACTGGGGTGAAGGCTAAGGATATTGGGATTTTGGTGGTGAATTGTAGCTTGTTCAACCCCACACCATCTCTCTCTGCAATGATTGTGAACCACTACAAGTTGAGAGGCAATATCCAAAGTTATAATCTTGGTGGCATGGGTTGCAGTGCTGGCCTTATCTCTATAGACCTCGCCAAGCAGCTCCTCCAGGTTCATCCAAACTCTTATGCCTTAGTGGTGAGCATGGAGAATATCACTCTCAACTGGTATTTTGGCAACAACCGGTCAATGCTAGTCTCAAATTGTCTCTTCAGAATGGGTGGAGCTGCGGTCCTCCTCTCCAACAGGTATTCTGATAGCAGAAGAGCCAAATACCAATTGATCCATACAGTGCGTACTCATAAGGGTGCAGATGACAAATCTTATGGTTGCGTTTTCCAAGAAGAAGATGAGAAGAAAACAATTGGTGTGGCACTGTCAAAGGACTTAATGGCTGTTGCTGGAGAAGCCCTCAAGACCAATATCACAACACTTGGGCCATTAGTCCTTCCCATGTCAGAGCAGCTCTTGTTTTTTACAACTTTGGTGGCTAGAAAAGTGTTCAAGATGAAAATAAAGCCATACATCCCTGACTTTAAGCTAGCTTTTGAGCACTTTTGCATCCATGCTGGAGGAAGAGCAGTGTTGGATGAGTTGGAGAAGAATCTGGAGCTCACTGATTGGCACATGGAGCCTTCAAGAATGACTCTCAACAGGTTTGGTAATACTTCTAGCAGTTCCTTGTGGTATGAATTGGCCTACACTGAAGCTAAAGGGAGGATCAGAAAAGGTGACAGGACTTGGCAGATTGCATTTGGCTCTGGGTTCAAGTGCAACAGTGCTGTGTGGCGTGCATTGAGGACCATTAATCCTGCAAAGGAGAAAAATCCTTGGATGGATGAGATTCACGAGTTTCCTGTTCATGTGCCTAAAGTGGCAACCATTGGTTCCTAA 1554 0.4472 MADQTRDSGTVSVEASQERGRKLPNFLLSVRLKYVKLGYHYLISNAMYLLLIPLIGVASAHLSTISYQDVAQLWENLKFNLVWVTACSSLIVFLVTFYFMSRPRGVYLVDFACYKPEQDCTCTREIFMDRSMKTGVFSEENLAFQKKILERSGLGQKTYLPPAILSIPPNPCMAEARKEAEQVMFGAIDQLLAKTGVKAKDIGILVVNCSLFNPTPSLSAMIVNHYKLRGNIQSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNNRSMLVSNCLFRMGGAAVLLSNRYSDSRRAKYQLIHTVRTHKGADDKSYGCVFQEEDEKKTIGVALSKDLMAVAGEALKTNITTLGPLVLPMSEQLLFFTTLVARKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELTDWHMEPSRMTLNRFGNTSSSSLWYELAYTEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTINPAKEKNPWMDEIHEFPVHVPKVATIGS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01550 517 SUPERFAMILY Thiolase-like 92 309 IPR016039 GO:0016746
Lapu7g01550 517 PANTHER 3-KETOACYL-COA SYNTHASE 76 508 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lapu7g01550 517 CDD CHS_like 88 483 - -
Lapu7g01550 517 SUPERFAMILY Thiolase-like 315 485 IPR016039 GO:0016746
Lapu7g01550 517 Pfam FAE1/Type III polyketide synthase-like protein 98 387 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lapu7g01550 517 PIRSF Very_long_ch_3-ktacl-CoA_syn 25 517 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lapu7g01550 517 Gene3D - 113 485 IPR016039 GO:0016746
Lapu7g01550 517 FunFam 3-ketoacyl-CoA synthase 116 485 - -
Lapu7g01550 517 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 404 484 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01550 Lapu-Chr7 30936287 30939056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01550 17 515 Miscellaneous Gene Families AT2G26640 76.553 0.0 825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01550 7 30936287 30939056 Lapu7g01550 7 30936287 30939056 ECH