Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01500 ATGGACACAGCTCAGTGGCCACAGGAGATGGTGGTGAAACCAATAGAAGATATACTAGTGACACATACATGTCCAAAGGTTGCAGGTGCGGTGGAAAGGAAGCCAAGGCCTCAGAAAGAACAAGCTCTTAACTGTCCAAGGTGTCATTCAATCAACACCAAGTTCTGCTACTACAACAACTATAGCCTCACACAGCCTCGCTATTTCTGCAAGACTTGTAGAAGGTATTGGACTGAAGGTGGATCCCTCAGAAACATTCCTGTAGGAGGTGGCTCCAGGAAGAACAAGAGATCTTCTGCTTTTTGTTCCACACCTCATAATAATTCACCCGATAAGAAGCTTCCTGATTTGGTCATCACACCTCCATCTTTATCACACTCTCAAAACCCTAAGGATAGTATTCATCGAAGCCAAGATCTCAATCTGGCTTTCCCATCCACAACCCCAGATTTCAGAAACATCTCTGAATTGGTTCAACAAAACAACAACAGCAGCAGCAACAGCATGTCTGCTTCGGCTTCTTCTTCTTCTTCAACTACTACTACCACCACACCTTCAACTTCTCACCTTTCTGCATTGGAGCTTCTTACTGGGATCACTTCAACTTCCACTGGCTTGAATTCCTTCATGCCTGTGCCAGTTCCCGGTGATCCAAATTCTGTCTACACCTGTGGCTTTCCCCTGCAAGATTTCAAGCCAACCTTGAATTTCTCTTTAGATGGGATTGGACACGGGTATGCGAGCCTGCATAATGTTCAAACTGGGAGGCTCTTGTTTCCGTTCGAGGACTTGAAACAGGTTTCCACTACCACTACAACGGATCAGAAGCAACAAGGAGATTCAACTGGGTATTGGACTGGAATGTTAGGCGGAGGATCATGGTAA 885 0.4554 MDTAQWPQEMVVKPIEDILVTHTCPKVAGAVERKPRPQKEQALNCPRCHSINTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSAFCSTPHNNSPDKKLPDLVITPPSLSHSQNPKDSIHRSQDLNLAFPSTTPDFRNISELVQQNNNSSSNSMSASASSSSSTTTTTTPSTSHLSALELLTGITSTSTGLNSFMPVPVPGDPNSVYTCGFPLQDFKPTLNFSLDGIGHGYASLHNVQTGRLLFPFEDLKQVSTTTTTDQKQQGDSTGYWTGMLGGGSW* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01500 294 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 33 178 IPR045174 GO:0003700|GO:0006355
Lapu7g01500 294 MobiDBLite consensus disorder prediction 161 189 - -
Lapu7g01500 294 MobiDBLite consensus disorder prediction 270 284 - -
Lapu7g01500 294 Pfam Dof domain, zinc finger 41 97 IPR003851 GO:0003677|GO:0006355
Lapu7g01500 294 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Lapu7g01500 294 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Lapu7g01500 294 MobiDBLite consensus disorder prediction 270 294 - -
Lapu7g01500 294 MobiDBLite consensus disorder prediction 85 134 - -
Lapu7g01500 294 MobiDBLite consensus disorder prediction 96 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01500 Lapu-Chr7 30435151 30437562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01500 1 294 C2C2-Dof Transcription Factor Family AT4G24060 43.785 2.48e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lapu7g01500 zf-Dof 3.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01500 - - pvu:PHAVU_001G080800g 491.886