Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00125 ATGATGGAGAGTGGGTGGAAGCCTGAGGTTGAGATATCACCAAATTGTCCTAGGTGTGGTTCTTCCAACACCAAGTTCTGCTACTACAATAACTACAGCTTAACTCAACCAAGGTACTTTTGCAAAGGGTGCAGAAGGTACTGGACCAAAGGAGGGTCTCTCCGCAATGTGCCTGTTGGTGGTGGCTGCAGGAAAAACAGAAGAGGTAACAAGACCTTGTTGAGACAATCCATTGATGGTTTCACTTTCAAAAGTTCATCATCATCATCTTGTGGCAATACCACAGATCATAATAATAACCCTGTTGGGCATTCTTATGATCCTAGAATAAGGACTTCTGCAGCTTCTAGCTCCTCCTCCTCAGCGGTGAGTGATGGACCAAATATTGATCTTGCACTAGTGTATGCAAATTTCCTCAACCAAAAGCCCAGTTCAGAATCTGGGATTGAGAGCAATAATCCAGATCAAGTTCAAACAGGTTTCGATCCCACTCTAGAGAATAATTCAAGGCTACCGAACACAGATGCTGCTGGTCCAACTACTTTGGCTGAAGAAATTGGTCTTACTGGGTGTTTGAATCTTCCTGAACAACCATCCACACATTCTGTTGAGGCTAATAATAACAGCCAAATGTGCTACGGTGAGTTCAACACTATGCAGACTATTCAGAAAGATGGAATTGAGCAGTGTAGTAGTCATGGTGGTGCTATGAATTTTGAGCTGCCACCATTACCGGGTGAAGTGGAAGCCTCACATGATCATCATATGATGTGGTCAAATTCTGAGATGATGATAAATCATCACGCATTTCAAGCCACGCAACCACCACTTCTTGGACCTGAAGTTCATGATGCAGACTTATTAATAGGTAATTGGAGTCCCTTTGATTTGCCTTGA 897 0.4314 MMESGWKPEVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNKTLLRQSIDGFTFKSSSSSSCGNTTDHNNNPVGHSYDPRIRTSAASSSSSSAVSDGPNIDLALVYANFLNQKPSSESGIESNNPDQVQTGFDPTLENNSRLPNTDAAGPTTLAEEIGLTGCLNLPEQPSTHSVEANNNSQMCYGEFNTMQTIQKDGIEQCSSHGGAMNFELPPLPGEVEASHDHHMMWSNSEMMINHHAFQATQPPLLGPEVHDADLLIGNWSPFDLP* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00125 298 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 197 IPR045174 GO:0003700|GO:0006355
Lapu7g00125 298 MobiDBLite consensus disorder prediction 83 125 - -
Lapu7g00125 298 MobiDBLite consensus disorder prediction 144 176 - -
Lapu7g00125 298 Pfam Dof domain, zinc finger 15 68 IPR003851 GO:0003677|GO:0006355
Lapu7g00125 298 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Lapu7g00125 298 MobiDBLite consensus disorder prediction 144 178 - -
Lapu7g00125 298 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00125 Lapu-Chr7 1370366 1371587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00125 6 297 C2C2-Dof Transcription Factor Family AT3G52440 38.689 7.36e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lapu7g00125 zf-Dof 4.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00125 - - gmx:100794208 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00125 7 1370366 1371587 Lapu7g00125 7 1370366 1371587 ECH