Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02541 ATGTTGTTGCATTTATCGTCCAAAGCTAGGGGATTTAACCACAGTTACTACCATCCGTTGCACATAGCAATACTAAAAGGAGATTGGCAATCTACAAAGGCTTTTCTTGACAATGACCCAAGTGCATTGACTGCAAAGATCACCATACTTGGAAGGACTGCGCTGCATGTGGCAGCTGTAGGAGGGCAGTGGCAGATTGTTGAGAAGTTGGTGCAACATGTTCCTACACAAGTACTTGAAGAGCTGGACTTGATGGGTTGTACATGCTTGCACTATGTTGCAATGGGTGAAAGCAGAAGTGCTGCCCAGGCATTGGTTGCTAAAAATCCTTCTCTTACACAACTCACTGACTTTAAAGGATTCACACCACTTATCTACACTATTACCTCTGCTAGATGCAAAGAGATGGTATGGTACTTTGTTTTGAATACTACAGATGAAAGACCTGGCTGTCCATTCTCTGGTCCTTCTGCTGGTCAACTTGTTGCTTTGCTTACCGCTGCAGGATTTCATGATGTCACTATATATCTTCTCCAGCGCTACCCAAATTTGGCTACTCTCTCAGATTCAACGGGGAGCATTATACTTAATGTTTTATCAAAATTGCCCTCGGACTTTCAAAGTGGAAATAAGCTTGGGTTTTGGAAAAGATGCATTTACCACTGTTTGCCAGATGAACTTGATTTTTTACCACCAAGTCATCTGAGAGGAATTTTGAAAGATTCTGGGACTTCAAGCCATCACCAATCTTATTTTGGAAGTACAATATGGAATGGAATTCAGAATATTGTTCCTGGCATAAAGCTGGTCAGAGAGGCAAAGTTGAGGTACTTATCTGCTGCGAGATTGGTGGAACTCGTTTGCACACAGGTTTCAAATTTGAATGACACTGAATTCTGGCAGTCTTTTGTGAGTGCAGACATTGTTTTCAATGCCTCATCATCTGGCATAGTTGAAATTTTAAGGACCTGTTTCCAGTTTTTTCCTGATTTGGTTTGGACTCATATGCCAAATGAAGGATACGTAGCCCAAACTGCCATCAAGTATCGGCAAGAGAAGGTTTTTAGTCTTCTATGCAAGATGCCTATAGTTTGCAAGTTCTTAGTCTTGGCATTAGATGAATCTCAAAATACCACATCACATCTAGCAGCAAGATTTGCTTCTCCTCAACAGGCATCAATTTCTGGTGCAGCCTTTCAAATGCAAAAAGAATTGCAGTGGTTTAAGGAAGTAGAGAAATGGGATCACCCTCTTCATAAAGAAGTTAAAAACAAAGATGGTAAAACACCTTGGCAATTGTTCAGGGAAGAGCATAAGCCCTTGCTTGAAGAAGCAAAGATTTGGATGAAGGATACATCAAACTCTTGCATGTTAGTGGCAACTCTTATTGCTACAGTTGTCTTTGCTGCTTCTATAACTGTACCTGGAGGAAACAACCAAGACAAAGGATTTCCGTTATTCTTGTCAGATAACACATTCATGTTGTTTGTTGTGTCAGATACATTAGCTTTGTTTTCCTCCATGGTTTCCCTTTTGATGTTTTTATCAATTCTAACTGCACATTATGCAGAAGAAGATTTTCTCAAGAGATTACCCGAGAGAATAATATTGGGTCTGGCTTCTTTGTTCTTTTCCATAGTAACTACGATGATAGCATTTGGTGCAGCTCTGGATCTGTTGCTGAGGGAGAGACTGAAATGGGTGTCAATCCCAATTGCTCTTCTGGCATGTGTCCCAGCTGCTCTATTTGCAGGGCTTCAACTTCCTTTGTTCATACAAATGATCGTATCAACTTATGGTTCTTGCATATATCATCGTCAAAGTCTTTGGTAA 1833 0.4059 MLLHLSSKARGFNHSYYHPLHIAILKGDWQSTKAFLDNDPSALTAKITILGRTALHVAAVGGQWQIVEKLVQHVPTQVLEELDLMGCTCLHYVAMGESRSAAQALVAKNPSLTQLTDFKGFTPLIYTITSARCKEMVWYFVLNTTDERPGCPFSGPSAGQLVALLTAAGFHDVTIYLLQRYPNLATLSDSTGSIILNVLSKLPSDFQSGNKLGFWKRCIYHCLPDELDFLPPSHLRGILKDSGTSSHHQSYFGSTIWNGIQNIVPGIKLVREAKLRYLSAARLVELVCTQVSNLNDTEFWQSFVSADIVFNASSSGIVEILRTCFQFFPDLVWTHMPNEGYVAQTAIKYRQEKVFSLLCKMPIVCKFLVLALDESQNTTSHLAARFASPQQASISGAAFQMQKELQWFKEVEKWDHPLHKEVKNKDGKTPWQLFREEHKPLLEEAKIWMKDTSNSCMLVATLIATVVFAASITVPGGNNQDKGFPLFLSDNTFMLFVVSDTLALFSSMVSLLMFLSILTAHYAEEDFLKRLPERIILGLASLFFSIVTTMIAFGAALDLLLRERLKWVSIPIALLACVPAALFAGLQLPLFIQMIVSTYGSCIYHRQSLW* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02541 610 ProSiteProfiles Ankyrin repeat profile. 50 73 IPR002110 GO:0005515
Lapu6g02541 610 PANTHER CASKIN 48 600 - -
Lapu6g02541 610 Pfam Domain of unknown function 448 557 IPR026961 -
Lapu6g02541 610 Gene3D - 2 149 IPR036770 -
Lapu6g02541 610 ProSiteProfiles Ankyrin repeat region circular profile. 50 73 - -
Lapu6g02541 610 SUPERFAMILY Ankyrin repeat 14 143 IPR036770 -
Lapu6g02541 610 SMART ANK_2a 50 79 IPR002110 GO:0005515
Lapu6g02541 610 SMART ANK_2a 85 114 IPR002110 GO:0005515
Lapu6g02541 610 SMART ANK_2a 15 45 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02541 Lapu-Chr6 25403785 25407717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02541 404 586 Miscellaneous Gene Families AT3G12360 28.108 4.39e-10 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02541 6 25403785 25407717 Lapu6g02541 6 25403785 25407717 ECH