Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00170 ATGGTGTTGATCAACGAAGAAATTGACCCCTACGTGCAAGAGGAAATCACTGAAGAAGACAACGAAGATGAGAGCATCGACTATGATCAGCTGAAAAAACGCATGTGGAAGGATAGGATTCTGCTACAGAAGCTGAAGGAGAAGCGTGAGAAACAAGAGCCGGACAAAGAAGCAAAAATAGATGCATCCAGGAGGAAGAAGATGTCAAGAGCACAAGACTCGGTCCTCAAGTACATGGTGAAGATCATGGAAGTCTGCAACGCCCAAGGGTTTGTTTATGGCATCATCCCAGAAAAGGGGAAGCCCGTGTCTGGTTCCTCCGACAGCTTGCGCGAGTGGTGGAAGGATCAAATCCGCTTTGACCAAAACGCCCCCACTGCAATATCAAAGTACTTGCCACTCTTTGAAAAAGATGAGATGGATATAACTTCCTATATTCACCTCCTCCAAGACTTGCAAGACTCTACTTTAGGTTCTCTCTTATCTGCTCTCCTGCAACACTGTGTCCCTCCACAAAGAAAGTTCCCTTTGGAGAGAGGGTTATGTCCCCCCTGGTGGCCCACTGGGGAGGAGCTTTGGTGGGGTGAGCAGGGCCTTCTGGCCCAAGAACATGGCCCACCACCTTATAGAAAGCCCCATGACTTGAAAAAGGCTTGGAAAGTTTCTGTTCTGGCTGCAGTTATCAAACACATATCACCTGATTTTGAAAAACTGAGAAGGTTGGTGACTCAGTCCAAGACCTTGCAAGATAAGATGACAGCCAACGATAGTGCGACTTGGTCCAAAGTCATGAACCAAGAAGAGGTTTTACTAGGAATAACTGATAAGTGCCGCAAAATATCTGTTTCAAAGGAAGATGTTGAGAACCATGAAGAGGGAGAAAGTTATGATTCTGCTCAACTTTTGAAGAGGAAGGGCTCTTTTGGTGCTAGTGAGGATGATAAGCTATATGCATGTCAAAACGTTGAGTGTCCACAGAGCGAGTTGTCTATGGGGTTTGTGGATAAGAACGCGAGGTTGGACCATGAAGCTCTCTGTGCCTTCCGCACAGAGGATAGCCACGTTCCTTTTCATCGTTATCTCTCCAATGAAGCATCACCAATCACGAGTTTAGATGATTGGTTGAATGTGGCTATTCAGAATGATGCAAAGGTGCTGGAGGCTGGTGGTGGGAGTGGGACATTGGAAGATAACGCCTGTTACTGGCTTAATGGTGTCGAAAATCTTGAATTGGAAGCTGCACTAGAGATGTTAGTGAAAGATAACGTGGACTTTGATCAAAACCCAATGCAGATTCTTCAGGGTCAAGAGGATGCAACCTCCATTTGGGAATTGCCAAGCCTTCCACCCCAATAG 1356 0.4617 MVLINEEIDPYVQEEITEEDNEDESIDYDQLKKRMWKDRILLQKLKEKREKQEPDKEAKIDASRRKKMSRAQDSVLKYMVKIMEVCNAQGFVYGIIPEKGKPVSGSSDSLREWWKDQIRFDQNAPTAISKYLPLFEKDEMDITSYIHLLQDLQDSTLGSLLSALLQHCVPPQRKFPLERGLCPPWWPTGEELWWGEQGLLAQEHGPPPYRKPHDLKKAWKVSVLAAVIKHISPDFEKLRRLVTQSKTLQDKMTANDSATWSKVMNQEEVLLGITDKCRKISVSKEDVENHEEGESYDSAQLLKRKGSFGASEDDKLYACQNVECPQSELSMGFVDKNARLDHEALCAFRTEDSHVPFHRYLSNEASPITSLDDWLNVAIQNDAKVLEAGGGSGTLEDNACYWLNGVENLELEAALEMLVKDNVDFDQNPMQILQGQEDATSIWELPSLPPQ* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00170 451 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 353 IPR006957 GO:0003700|GO:0005634
Lapu6g00170 451 FunFam Ethylene insensitive 3-like 1 140 277 - -
Lapu6g00170 451 Pfam Ethylene insensitive 3 30 268 IPR047091 GO:0003700
Lapu6g00170 451 MobiDBLite consensus disorder prediction 47 66 - -
Lapu6g00170 451 SUPERFAMILY DNA-binding domain of EIN3-like 146 270 IPR023278 GO:0003700|GO:0005634
Lapu6g00170 451 Gene3D - 58 137 IPR023278 GO:0003700|GO:0005634
Lapu6g00170 451 Gene3D - 138 276 IPR023278 GO:0003700|GO:0005634
Lapu6g00170 451 FunFam Ethylene insensitive 3 family protein 57 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00170 Lapu-Chr6 1404613 1405968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00170 6 378 EIL Transcription Factor Family AT5G10120 52.417 1.21e-133 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lapu6g00170 EIN3 3.7e-115 No_clan