Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01496 ATGGAGGAGAATGGTAGCTCAAGTAATGAATCCAAGAACAGGAAAAACCTTCCTGTCTCAGTTTTCTTCAAAGATGCAAGACATGTTTTCAAGATGGATTCCATTGCTAAGGAGATACTTGGGATTGCATTCCCATCTGCACTGGCTGTTGCTGCTGATCCTATTGCTTCTCTCATTGACACAGCATTCATAGGCCACTTGGGGCCCGTGGAGCTTGCCGCTGCAGGAGTGTCCATCGCTTTGTTCAACCAAGCTTCAAGAATTACCATCTTCCCTTTGGTTAGCATCACAACATCCTTTGTGGCTGAGGAAAATACCATCGAAAAAATCAACAAAGAAAAGCAGTTGACTGAAAACATTAAGTCCAAGGAAGTAAGGCCCGAGGATAATTTGATTCAAGACATAGAAAAAGGAGCATCCAAAGAAAACAATGAAAGTCCAACAGAATCTTCATCTTCAAGAAATGGCACAACCGAGCTCGTGGTAAAAGGTTGTGCCCCTGAGAATGTGGAAATGGATGATTGCAATACAAGTATAAGCAAATCTACCTCTGCCAGTAGTAGTAGTAGTAATAGTAATAATAAGAGTATGTCAAAAGCTGGAAGGAAGAAGAGACACGTTGCTTCTGCATCAACGGCACTACTTTTTGGCACAATCCTTGGTCTCCTTCAAGCTGCAACTCTTATTTTTGCAGCAAAACCTCTATTAGCTGCAATGGGTCTGAAACCCGATTCTCCTATGCTAAATCCAGCTGTTAAATACTTGAGATTGAGATCTTTAGGTGCTCCTGCAGTGCTTCTCTCCTTGGCCATGCAAGGAATCTTTCGAGGATTCAAGGACACTACAACTCCTTTATATGTTATTGTTTCGGGGTATGCATTGAATGTCGCTTTGGATCCAATTCTTATCTTCTACTGCAAATTGGGCATCAAAGGTGCAGCCATTTCACATGTGCTCTCTCAGTATTTGATGGCATTGGCCCTCTTGTTGATATTAACTAGAAAAGTGGATCTCGTACCTCCAAGTATTAAGGACTTGCAGATTTTCAGGTTTCTTAAAAATGGAGGTCTTTTGTTGGCAAGAGTTGTAGCTGTGACATTCTGCCAAACCTTGGCAGCCTCATTGGCAGCAAGGTTTGGCCCAATTCCTATGGCTGCTTTCCAAACCTGCTTGCAGGTTTGGCTAACATCTTCCCTTCTTGCAGATGGTTTAGCTGTTGCTGTACAGGCAATTCTAGCCTGTTCCTTTGCTGAGAAAGATTATGAAAAGGTGATTGCTGCTGCAACACGAACTCTACAGATGAGTTTTGTTTTAGGAATTGGACTCTCTCTTGCAGTTGGAGTTGGCTTATACTTTGGAGCTGGAATCTTCTCCAAGAGTGTTCTTGTTGTGCACTTAATCAGAATAGGCCTCCCGTTTGTTGCCGCCACACAACCAATCAATTCATTAGCCTTTGTCTTTGATGGTGTGAACTATGGGGCTTCTGATTTTGCATATTCTGCATACTCCTTGGTTACGGTGTCATTAGCAAGTGTTGCTTCACTGTTCCTTCTCTCTAAGAGCAAAGGTTTCGTTGGACTATGGATTGCACTAACCATCTATATGAGTCTTCGCATGTTTGCTGGTGTATGGAGGATGGGAACAGGAACAGGACCATGGCGTTTTCTGAGAGGACGTTCAATGATGTCTTGA 1692 0.4285 MEENGSSSNESKNRKNLPVSVFFKDARHVFKMDSIAKEILGIAFPSALAVAADPIASLIDTAFIGHLGPVELAAAGVSIALFNQASRITIFPLVSITTSFVAEENTIEKINKEKQLTENIKSKEVRPEDNLIQDIEKGASKENNESPTESSSSRNGTTELVVKGCAPENVEMDDCNTSISKSTSASSSSSNSNNKSMSKAGRKKRHVASASTALLFGTILGLLQAATLIFAAKPLLAAMGLKPDSPMLNPAVKYLRLRSLGAPAVLLSLAMQGIFRGFKDTTTPLYVIVSGYALNVALDPILIFYCKLGIKGAAISHVLSQYLMALALLLILTRKVDLVPPSIKDLQIFRFLKNGGLLLARVVAVTFCQTLAASLAARFGPIPMAAFQTCLQVWLTSSLLADGLAVAVQAILACSFAEKDYEKVIAAATRTLQMSFVLGIGLSLAVGVGLYFGAGIFSKSVLVVHLIRIGLPFVAATQPINSLAFVFDGVNYGASDFAYSAYSLVTVSLASVASLFLLSKSKGFVGLWIALTIYMSLRMFAGVWRMGTGTGPWRFLRGRSMMS* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01496 563 MobiDBLite consensus disorder prediction 121 143 - -
Lapu5g01496 563 MobiDBLite consensus disorder prediction 121 159 - -
Lapu5g01496 563 NCBIfam MATE family efflux transporter 45 528 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu5g01496 563 MobiDBLite consensus disorder prediction 144 159 - -
Lapu5g01496 563 MobiDBLite consensus disorder prediction 173 197 - -
Lapu5g01496 563 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 5 558 IPR044644 -
Lapu5g01496 563 Pfam MatE 362 509 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu5g01496 563 Pfam MatE 200 301 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu5g01496 563 MobiDBLite consensus disorder prediction 173 203 - -
Lapu5g01496 563 CDD MATE_DinF_like 37 548 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01496 Lapu-Chr5 28224459 28232767 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01496 5 28224459 28232767 Lapu5g01496 5 28224459 28232767 ECH