Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01464 ATGAAACCAACACTCTCACTCTCTCCTTTATTCTTTTTCCTACTCTTCTCCCTAGTCCAAGGGCTGAACCCCAAATGTGACATCCAAGACCATGGCTCAACCCTGCAAGTTTTCCATGTGTTCAGCCCTTGTTCCCCATTTAGGCCATCAAAGGAACTTTCATGGGCAGAGAGTGTCCTCCAACTGCAGGCCGAGGACCGAACCAGGCTGCAGTTCCTGGCTAGCTTGGTGGCTGGGAGGTCTGTTGTGCCTATTGCCTCAGGCAGACAGATTATTCAGAGCCCAACTTACATTGTGAGAGCCAAAATAGGCACACCACCACAAACCTTGCTCTTGGCCATGGACACCAGCAATGATGCTGCTTGGATTCCTTGCACTGCCTGTGATGGCTGCACATCAACCTTGTTTGCTCCCGAAAAGTCCACCACATTCAAGAATGTTAACTGTGGTGCTCCTGAATGCAACCAGGTGCCAAACCCTAGTTGTGGAAGCAGCTCCTGCAGCTTCAACTTGACTTATGGTAGCTCAACCATTGGTGCTAACGTGGTCCAAGACACGGTTACTCTTGCCACCGACCCTATTCCTGGTTACACCTTCGGCTGTGTTACGAAGACTACTGGGCCCAGTACACCACCACAGGGCCTATTGGGATTGGGCCGAGGCCCATTATCTTTGCTGTCCCAGACCCAGAACCTCTATCAATCCACTTTCTCTTACTGCTTGCCCAGCTTCAAATCACTCAACTTCTCTGGCTCACTCAGACTTGGGCCTGTGGCCCAGCCCATTAGGATCAAGTACACCCCTCTTCTCAAGAATCCCAGAAGATCTTCACTCTATTATGTCAACTTGGTTGCAATTAGGGTTGGCCGGAGAGTCGTCAATATTCCTCCGGAGGCGTTGGCCTTCAATCCGGCCACCGGAGCCGGCACCATCTTTGATTCTGGCACGGTGTTCACCCGGCTAGTTGCGCCGGCGTATGTGGCGGTCCGGGACGAGTTCCGGCGACGAGTGGGGGCAAAGGCAAACCTAACGGTGACAACCCTAGGAGGGTTTGACACATGCTACACAGTCCCCATTGTTGCACCAACCATAACATTCATGTTCTCAGGCATGAATGTGACCCTGCCACAGGACAACATTCTCATACACAGTTCTGCAGGAAGCACCACGTGCTTGGCCATGGCTTCAGCTCCAGATAACGTGAACTCAGTGCTCAACGTCATAGCCAACATGCAGCAACAAAACCACCGTGTGCTCTTCGACGTCCCCAACTCGAGGCTTGGTGTTGCTCGTGAACTTTGCACCAAATAA 1311 0.5202 MKPTLSLSPLFFFLLFSLVQGLNPKCDIQDHGSTLQVFHVFSPCSPFRPSKELSWAESVLQLQAEDRTRLQFLASLVAGRSVVPIASGRQIIQSPTYIVRAKIGTPPQTLLLAMDTSNDAAWIPCTACDGCTSTLFAPEKSTTFKNVNCGAPECNQVPNPSCGSSSCSFNLTYGSSTIGANVVQDTVTLATDPIPGYTFGCVTKTTGPSTPPQGLLGLGRGPLSLLSQTQNLYQSTFSYCLPSFKSLNFSGSLRLGPVAQPIRIKYTPLLKNPRRSSLYYVNLVAIRVGRRVVNIPPEALAFNPATGAGTIFDSGTVFTRLVAPAYVAVRDEFRRRVGAKANLTVTTLGGFDTCYTVPIVAPTITFMFSGMNVTLPQDNILIHSSAGSTTCLAMASAPDNVNSVLNVIANMQQQNHRVLFDVPNSRLGVARELCTK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01464 436 Gene3D Acid Proteases 78 256 IPR021109 -
Lapu5g01464 436 Pfam Xylanase inhibitor C-terminal 279 428 IPR032799 -
Lapu5g01464 436 Gene3D Acid Proteases 258 436 IPR021109 -
Lapu5g01464 436 Pfam Xylanase inhibitor N-terminal 97 256 IPR032861 -
Lapu5g01464 436 PANTHER ASPARTYL PROTEASES 25 428 IPR001461 GO:0004190|GO:0006508
Lapu5g01464 436 FunFam aspartyl protease AED3 75 256 - -
Lapu5g01464 436 ProSiteProfiles Peptidase family A1 domain profile. 97 430 IPR033121 -
Lapu5g01464 436 FunFam Aspartyl protease AED3 257 435 - -
Lapu5g01464 436 SUPERFAMILY Acid proteases 95 434 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01464 Lapu-Chr5 27828671 27833402 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01464 5 27828671 27833402 Lapu5g01464 5 27828671 27833402 ECH