Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01283 ATGCCCCCACTTTGGTGTTTGCAACAGCAACATCAACACCATTCTTTTCACTCACTGGATGTTATGTCTCTCTCACGCCTCATCACTCCTCTCTCCTGCACCTCTTCAACTTCAGATTCTTTGGCGACTGCATCATATGTGAAGGAGAAAATGGATAATACATCATGGCGCCTTGTGGACTCAAAAGAAAGAATCAGGAAAATGTTCAACAATGTTGAACTTTCTATTTCTTCGTATGATACAGCTTGGGTGGCAATGATACGCTCTCCAGCTTCTCCTCACACCCCACTTTTCCCTCAGTGCTTAAATTGGTTGTTGGCTAATCAACTCTTAGATGGTTCCTGGGGTCTACCTGATCGCCATCCATTACTAATGAATGATGCTCTCTTGTCTACCTTAACATGCATCCTTGCTCTGAAGCAATGGGGTGTTGGAGAGGATCAAATTAACAGGGGTCTTCAGTTTATTGAGTCAAACATTACTTCAATCGACGATGAGAAGCAGCACCTTCCCATAGGATTTGGTATAAATTTTCCTTCTTTGATCGAATATGCACAAAATTTGGGCATTAACATTCCAGTTGGAGCTACAAGTTTGGATACAATGATCCAGAATAGAGAAATAGAGCTCCAGAGAGGTACTCAAAGCAATTCAGAAGGGTGGAGAGCATATCAAGCATATGTTTCAGAAGGAATGCTGGATTCACAAGACTGGAAAACAATCATGAAATATCAAAGAAAGAATGGATCTTTGTTTAATTCACCTGCTACAACAGCAGCTGCTTTTCAGAGCCTTAAGAATGCTGAATGTCTTGGTTATCTCCAATCTGTATTAGAAAAGTTTGGAAATGCAGTTCCGACAATTCACCCTCAGGATATATATGCTCGTCTCTATATGATTGATAGTCTTGAAAGGTTGGGTATTAATCATCATTTCAAAGAGGAAATTCGTAGTGTATTGGATGATACATACAGATTTTGGGTGCAAGGAGTGGAAGATATATTCTTAGATCCCACCACCTGTGCCATGGCGTTTCGTATGTTGCGTCTCAATGGCTATGATGTATCTTCAGATCCATTTTATCAATATTCTGAAGATAAATTTGCTGACTCCTTGAAAGGGTACTTGAAGGATGTTGAAGCTGTTATAGAGCTGTATAGGGCTTCACAAGCCATTATACATCCTGATGAATCAATTTTGATGAGACAAAGTTTGTGGACGAAACATCTTCTGAAGCAGGAATCCTCCCCTTACAGATTATATGCCGATAAGCTTCGTAGTTCTGTCGACCAAGAGGTGAAGGATGTTCTCAATTTTCCTTTGCATGCAAATTTGGAGCGCTTGTTAAACAGGAGATCAATGGAGTATTATAATGTAGAAGAAACAAAAATTTTAAAAGCATCATATAGATCTTGCAATCTTGCAAACCGAGAAACTCTAAAGCTAGCAGTAGAAGACTTCAATATGTGCCAATCAATACACATTGAAGAGTTGAAACAGCTTTCAAGATGGGTTGTTGAGAACAGACTAGACAAACTAGAATTTGCCAGGCAGAAACTGGCCTACTGTTACTTCTCTGGTGCAGCTACACTTTTCTCCCCTGAACTTTCTGATGCTCGCATATCCTGGGCAAAAAATGGGGTGCTCACAACAGTTGTTGATGATTTCTTTGATGTTGGGGGATCTGAAGAGGAACTACTGGACCTCATTCAACTAGTTGAGAAGTGGGATGTAGATATCAACACTGTTTGTTGCTCTGAGACAGTTAAGATTATATTTTCCGCAATTCACAGCACAGTCTGTGAGATTGGAGAGAAATCAGTCAAGCGGCAAGGACGTAATGTGAAAAACAATGTTATCAAGATTTGGTTGAATTTGATTCAGTCAATGTATAGAGAAGCTGAGTGGTTGCGAACCAAGACGGTGCCAACAATTGATGATTATATGGAAAATGCATACATATCATTTGCCTTAGGTCCAATTGTTCTTCCTGCCCTCTATCTTGTTGGACCTAAGCTTTCAAATGAAGATGCTGAAAATCATGAGTTGAACCATTTGTATAAGCTCATGAGTACATGTGGTCGTCTTCTTAATGACATTCACAGTTTTAAGAGAGAATATGAGGAAGGGAAATTGAATGCATTGGCTTTGCACATTGCTCCTGGCAATGGAGCTTTTACTGCTGAAGATGCCACTGAAAAACTGAAGGGTATTGCTGAGGAAAAGAGAAGAGAACTCCTGAGATTAATTTTGCATGAAAAAGGAAGTGTAGTTCCCAGAGATTGCAAGGATTTGTTTTGGAAAATGACAAAAGTTTTGCATCTATTTTACATGAAGGATGATGGATTTACTTCACATGAGATGTACTCTAGTGTAAAGGCTGTGATTAAAGATCCTGTCATCTTTGATGAATTGTTAGGACATGCTCGGCAGAACCTTAGTTCAGTCGAAGCCACTAATGTGATGCCCCAGTCCAATTAG 2481 0.3978 MPPLWCLQQQHQHHSFHSLDVMSLSRLITPLSCTSSTSDSLATASYVKEKMDNTSWRLVDSKERIRKMFNNVELSISSYDTAWVAMIRSPASPHTPLFPQCLNWLLANQLLDGSWGLPDRHPLLMNDALLSTLTCILALKQWGVGEDQINRGLQFIESNITSIDDEKQHLPIGFGINFPSLIEYAQNLGINIPVGATSLDTMIQNREIELQRGTQSNSEGWRAYQAYVSEGMLDSQDWKTIMKYQRKNGSLFNSPATTAAAFQSLKNAECLGYLQSVLEKFGNAVPTIHPQDIYARLYMIDSLERLGINHHFKEEIRSVLDDTYRFWVQGVEDIFLDPTTCAMAFRMLRLNGYDVSSDPFYQYSEDKFADSLKGYLKDVEAVIELYRASQAIIHPDESILMRQSLWTKHLLKQESSPYRLYADKLRSSVDQEVKDVLNFPLHANLERLLNRRSMEYYNVEETKILKASYRSCNLANRETLKLAVEDFNMCQSIHIEELKQLSRWVVENRLDKLEFARQKLAYCYFSGAATLFSPELSDARISWAKNGVLTTVVDDFFDVGGSEEELLDLIQLVEKWDVDINTVCCSETVKIIFSAIHSTVCEIGEKSVKRQGRNVKNNVIKIWLNLIQSMYREAEWLRTKTVPTIDDYMENAYISFALGPIVLPALYLVGPKLSNEDAENHELNHLYKLMSTCGRLLNDIHSFKREYEEGKLNALALHIAPGNGAFTAEDATEKLKGIAEEKRRELLRLILHEKGSVVPRDCKDLFWKMTKVLHLFYMKDDGFTSHEMYSSVKAVIKDPVIFDELLGHARQNLSSVEATNVMPQSN* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01283 826 SUPERFAMILY Terpenoid synthases 480 800 IPR008949 -
Lapu5g01283 826 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 247 461 IPR008930 -
Lapu5g01283 826 Gene3D - 75 278 - -
Lapu5g01283 826 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 78 269 IPR008930 -
Lapu5g01283 826 FunFam Ent-copalyl diphosphate synthase, chloroplastic 269 487 - -
Lapu5g01283 826 CDD Terpene_cyclase_plant_C1 290 799 IPR044814 GO:0010333|GO:0016102
Lapu5g01283 826 Pfam Terpene synthase family, metal binding domain 480 745 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lapu5g01283 826 FunFam Ent-kaur-16-ene synthase, chloroplastic 490 802 - -
Lapu5g01283 826 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 55 799 - -
Lapu5g01283 826 FunFam cis-abienol synthase, chloroplastic 75 278 - -
Lapu5g01283 826 SFLD Terpene Cyclase Like 1 N-term 50 470 - -
Lapu5g01283 826 Pfam Terpene synthase, N-terminal domain 237 429 IPR001906 GO:0010333|GO:0016829
Lapu5g01283 826 Gene3D - 67 487 IPR036965 GO:0010333|GO:0016829
Lapu5g01283 826 Gene3D Farnesyl Diphosphate Synthase 490 805 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01283 Lapu-Chr5 25660524 25665937 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01283 5 25660524 25665937 Lapu5g01283 5 25660524 25665937 ECH