Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01278 ATGGCGGAGAGTGGCGGTGGAAATCGCCGGGGGAAACCGCTGCGGGAATCACAGGAGGAAGAGGTTGCAAAAGCTTCATGGAGACTTAACGTGGAGGAGTTTCGTTTGCCAAACCAAACGCATGATCATCACCATCATCGTTCCTTCTCTTTCCGTGGCCTTCTCCACAAGCCCCGGAAGCAACGCAAAGTGGCAGAATATTACAAGCAGCAGGAGAGCCTACTTGAAGGATTTACCGAGATGGAGGTTATCACTGAAACGGGTGGTTTCCCTGGAGCTCTCACCGAGGATGAAATGAAGCAACTAGCTAAGAGTGAGAGGATGGCTGTTCATGTGTCAAATATATGCAACTTGGTGCTGTTTGCAGCCAAGGTTTACGCCTCAATTGCAAGCAGATCATTGGCAGTCATTGCCTCAACCATGGATTCTCTCTTGGATCTCTTGTCAGGGTTCATATTATGGTTTACTGCTCATGCCATGAAAAGCCCAAACCAATATCACTATCCAATCGGAAAGAAACGCATGCAACCAGTGGGTATCGTTGTTTTTGCATCAGTGATGGCAACCTTGGGGTTGCAGATTTTGATTGAATCTGCCAGGGAACTTATTTCCACGTCTAAGCCTGACATGGATCCAACAAAACTCCATTGGATGATAGGGATTATGGTGGGTGTGACTATAGTGAAGTTCATTCTTATGGTCTACTGCCGAAGATTTAAAAATGAAATCGTTAGAGCGTATGCACAAGACCACTTTTTTGATGTCATTACTAATTCTGTTGGATTAGCTGCTGCTGTTCTAGCTGTTAAGTTCTACTGGTGGATTGATCCAACAGGAGCTATTTTTATAGCATTGTATACAATTAATACATGGGCCAAGACTGTCATTGAGAATGTTGGTTCACTCATTGGAAGAACAGCACCACCAGACTTTCTGGCCAAGTTAACTTACCTCATATGGAATCACCATGAGCAGATTAAGCACATAGATACTGTTAAAGCATACACCTTAGGTGCAGATTACTTTGTGGAGGTTGACATTGTGTTGCCAGAAGATATGCTTCTCCACCAAGCACACAACATTGGTGAAACACTCCAAGAGAAGCTAGAGCAACTTCCAGAAGTTGAGAGGGCTTTTGTGCACATAGATTTTGAGTTCACTCACAGGCCAGAGCACAAGGCAATGGTGTGA 1191 0.4467 MAESGGGNRRGKPLRESQEEEVAKASWRLNVEEFRLPNQTHDHHHHRSFSFRGLLHKPRKQRKVAEYYKQQESLLEGFTEMEVITETGGFPGALTEDEMKQLAKSERMAVHVSNICNLVLFAAKVYASIASRSLAVIASTMDSLLDLLSGFILWFTAHAMKSPNQYHYPIGKKRMQPVGIVVFASVMATLGLQILIESARELISTSKPDMDPTKLHWMIGIMVGVTIVKFILMVYCRRFKNEIVRAYAQDHFFDVITNSVGLAAAVLAVKFYWWIDPTGAIFIALYTINTWAKTVIENVGSLIGRTAPPDFLAKLTYLIWNHHEQIKHIDTVKAYTLGADYFVEVDIVLPEDMLLHQAHNIGETLQEKLEQLPEVERAFVHIDFEFTHRPEHKAMV* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01278 396 MobiDBLite consensus disorder prediction 1 21 - -
Lapu5g01278 396 SUPERFAMILY Cation efflux protein transmembrane domain-like 105 304 IPR027469 -
Lapu5g01278 396 Gene3D Cation efflux protein, cytoplasmic domain 307 384 IPR036837 -
Lapu5g01278 396 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 16 393 - -
Lapu5g01278 396 FunFam Metal tolerance protein 11 109 302 - -
Lapu5g01278 396 Pfam Dimerisation domain of Zinc Transporter 309 383 IPR027470 -
Lapu5g01278 396 FunFam Metal tolerance protein 11 305 385 - -
Lapu5g01278 396 Gene3D Cation efflux protein transmembrane domain 107 302 IPR027469 -
Lapu5g01278 396 Pfam Cation efflux family 112 302 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lapu5g01278 396 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 307 383 IPR036837 -
Lapu5g01278 396 NCBIfam cation diffusion facilitator family transporter 109 383 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01278 Lapu-Chr5 25605642 25609050 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01278 5 25605642 25609050 Lapu5g01278 5 25605642 25609050 ECH