Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01276 ATGCACAAATTAGGAAGAGGTCATCGCGACAAACTCCAGCAGTTCATAACAATAACTGGAGCCAGTGAGAAAACAGCATTGCAGGCTCTGAAGGCTAGTGATTGGCATCTTGAAGGAGCATTTGATTTCTTTTATAGCCAACCCCAACTTAAAACATTTACTGATTCTAGACACTTGGAGGAGCTATACAATAGATATAAAGATCCATATGTTGATATGATTTTGGTAGATGGCATCACTCTCCTTTGCAATGATATTCAGGTGGATCCTCAAGATATAGTAATGTTAGTTCTTTCATGGCACATGAAGGCTGGCACCATGTGTGAATTTTCCAAGAAGGAGTTTATTGAAGGTTTACAATCTTTGGGGATTGATTCTCTGGAGAAGTTTCAAGAAAAGATACCATATATGCGCTCTGAGCTGAAAGATGAACAGAAATTCCGTGAGATATATAACTTTGCTTTTGGATGGGCAAAAGAGAAGGGTCAAAAGTCTCTTGCGTTGGATACAGCTATTGGTATGTGGCAATTATTATTTGCTGAGAAGCAGTGGCCACTGGTAGATCATTGGTGCCAGTTCTTGCAGGCTCGGCATAACAAAGCAATATCTAGGGACACATGGTCTCAGCTTTTGGAGTTTGCAAAGACTGTTGGTTCAAATTTATCTGATTACGATGCCGAAGGTGCCTGGCCATATCTTATTGATGAATTTGTGGAATATCTGAACGAGAATGGCGTCATCCAAAATGGTCTCATCAATGATTCTAGTCTAAAACGATGA 780 0.4 MHKLGRGHRDKLQQFITITGASEKTALQALKASDWHLEGAFDFFYSQPQLKTFTDSRHLEELYNRYKDPYVDMILVDGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQSLGIDSLEKFQEKIPYMRSELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFAKTVGSNLSDYDAEGAWPYLIDEFVEYLNENGVIQNGLINDSSLKR* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01276 259 FunFam Defective in cullin neddylation protein 143 248 - -
Lapu5g01276 259 Pfam UBA-like domain 9 47 - -
Lapu5g01276 259 ProSiteProfiles DCUN1 domain profile. 54 242 IPR005176 -
Lapu5g01276 259 Pfam Cullin binding 130 240 IPR005176 -
Lapu5g01276 259 CDD UBA_DCNL 8 48 - -
Lapu5g01276 259 Gene3D - 53 142 - -
Lapu5g01276 259 FunFam Defective in cullin neddylation protein 6 47 - -
Lapu5g01276 259 SUPERFAMILY UBA-like 7 46 IPR009060 GO:0005515
Lapu5g01276 259 Gene3D Cullin, PONY binding domain 143 250 IPR042460 -
Lapu5g01276 259 PANTHER RP42 RELATED 22 245 IPR014764 -
Lapu5g01276 259 FunFam Defective in cullin neddylation protein 53 142 - -
Lapu5g01276 259 Gene3D - 6 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01276 Lapu-Chr5 25568228 25580339 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01276 5 25568228 25580339 Lapu5g01276 5 25568228 25580339 ECH