Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00077 ATGGCCGATGCAGGGAAGAGTTTCAAGAGCTTCAAAACATTGTTGATTGTAGCTTCCATAACCTTCCCTATTTTGATCACATTTTCTGTCACACGCCAAAACTCAATCTTTGATGTCCTCCAAGAATTTAACATATTGACAGAAGGAACCCAGAATACTACTAATAAACAAGGGACTCAAAATACTGCAGCAGTTCAAGCTGGGGGAGAAAAGAATGCCAATATCAGTGAGTCAATTGTAGGTCCAAAGAATAATTCATTTCAAGATGGGGAGAATGATCTATCCCTATCTACTACTACCAGTGCCAATGACAAGCTCCTTGATGGACTTTTAGTTTCCTCATTTGATGAAGCATCATGTATTAGCAGGTTTCAGTCTTATTTGTATCGGAAAGCTTCTCCTCACAAACCTTCTAAATATCTCATATCCAAACTACGAAACTATGAACAACTTCATCAAAGTTGTGGACTTTATACAAAGTCCTACAACGAAACTATGAAAAAGGGTGCAAAATTTAGCAAACATGATGTTGGCAAGTGCAGATATATGGTCTGGACAACTGCAAATGGCTTAGGGAACAGGATGATAACCTTGGTTGCGGCATTTCTTTATGCAATCATCACAGACCGCATTCTTCTTGTTAGATTTGAGGCTGATATGTTGAATCTCTTTTGTGAGCCATTTCCTAATACCTCATGGTTGTTGCCCAAGAATTCCCCTTATTGGAACGATCTGAGACAATTTGAAACACTTGAAAGCATGTCTATGAATAAGAAGGGAAATAGTTCTGATGAGCTTTTGCCATCGGTTCTTGTTCTTGATTTAACGCACACCCATGTTGGTCATACTAATGTTTTTCATTGTGATCAAAGTCAGGATCTTCTACAAAAAATTCCCGCGCTGATTTTATGGTCGAATCAATATTTTGTCCCTTCTCTTTTTATGATATCCTCATTTAGAGAAGAGTTGAGCAAAATGTTCCCTGACAAAGATACTGTTTTTCACCATCTAGGACGCTACCTTTTTCACCCATCAAATGAGGCATGGGAACAAATTCAGAAATTATATGAGGCACACCTAGCCAAGGAAAATGAGAGGATTGGCCTGCAGATTAGAGTATTTAATGAACATCAAGCACCACAACAAACCATTATTAATGAAATTATATCTTGCGCCCATCAAAATAAGTTGTTGCCAAAATTCAACATGCAAAGCTCAATGACTTCTCCTTTGAAAAATCATACCTCAAAAGTTGTTCTGGTAGTATCTTTATACTCAAAATATGGTGAGAAGCTGAAGACTATGTATCAAGCTAACACAACTTTAAGCAGGGAAGTAATAAAAGTATATCAGCCAAGTCATGAAGAACATCAAAAGTCAGATGATGACAAGCACAACATTAAGGCATGGACGGAAATATATTTGCTGAGTTTGTGTGATGCATTGGTTACAAGCCCCATGTCCACTTTTGGGTATGTTGCTCATAGTCTTGGAGGTTTGAAGCCATGGATTTTGAAAAGTGTATATGGGGAAATTATCCCGGATCCACCTTGTCAACGAGCCACGTACATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGATTGTAGGTCCAATACTACAATCGATTTTACTTCCCTTTTCAATCATATTAGGCACTGCGAAGATGTATCAAGTGGACTGAAGGTGGCTAATGCTTATGACTAG 1707 0.3831 MADAGKSFKSFKTLLIVASITFPILITFSVTRQNSIFDVLQEFNILTEGTQNTTNKQGTQNTAAVQAGGEKNANISESIVGPKNNSFQDGENDLSLSTTTSANDKLLDGLLVSSFDEASCISRFQSYLYRKASPHKPSKYLISKLRNYEQLHQSCGLYTKSYNETMKKGAKFSKHDVGKCRYMVWTTANGLGNRMITLVAAFLYAIITDRILLVRFEADMLNLFCEPFPNTSWLLPKNSPYWNDLRQFETLESMSMNKKGNSSDELLPSVLVLDLTHTHVGHTNVFHCDQSQDLLQKIPALILWSNQYFVPSLFMISSFREELSKMFPDKDTVFHHLGRYLFHPSNEAWEQIQKLYEAHLAKENERIGLQIRVFNEHQAPQQTIINEIISCAHQNKLLPKFNMQSSMTSPLKNHTSKVVLVVSLYSKYGEKLKTMYQANTTLSREVIKVYQPSHEEHQKSDDDKHNIKAWTEIYLLSLCDALVTSPMSTFGYVAHSLGGLKPWILKSVYGEIIPDPPCQRATYMEPCFHYPPKYDCRSNTTIDFTSLFNHIRHCEDVSSGLKVANAYD* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00077 568 Gene3D - 347 502 - -
Lapu5g00077 568 Pfam Xyloglucan fucosyltransferase 99 537 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lapu5g00077 568 Gene3D - 177 232 - -
Lapu5g00077 568 PANTHER FUCOSYLTRANSFERASE 2-RELATED 27 564 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lapu5g00077 568 FunFam Galactoside 2-alpha-L-fucosyltransferase 178 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00077 Lapu-Chr5 639248 641063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00077 97 564 Xyloglucan Fucosyltransferase1 AT2G03220 48.945 1.13e-158 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00077 K13681 - gmx:100814715 837.41