Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00224 ATGGATCCTCCACCACTTTCTGCCGCAACTATCATCAGTACCACCACTCATAAACATCACCCTGATTCTGTAGAGTCTTCATCTCCATGTTCCCGCAATGCAGAAACATGGAATGATGAGACTTTACCGGTGGTTCCCGGTGCCAAGCTGCGTCTCATGTGCAGCTATGGTGGCCACATCATGCCTCGCCCTCATGACAAGACTCTTTGCTATGTCGGCGGTGACACAAGGATTGTGGTGGTGGACCGCCACTCTTCGTTGAAAGACCTGTGTGCACGGCTTTCCCGAACCATTCTCCATGGAAGACCCTTCACACTCAAGTACCAGCTTCCCAGTGAAGACCTTGATAGCCTCATCACTGTGACCACTGATGAAGATCTTGACAACATGGTGGAAGAGTATGATAGAATTATGGCGAAAGGTACGGCTTCTTCACGGCTCAGGGTGTTCCTGTTCTTCACCAAACCTGAAGCCACAGTTTCAATGGGGTCACTACTTGATGATGTGAAGTCAGAGACATGGTTTGTTGATGCACTCAACCACTCTGGAATGTTAAACAGGGTAGTTTCTGATACCGCTGCAGGGGATTCTTTTGTGAACCTTGATGGTGTTGGTGGTGGTGTAAGTGCTAGTGGTTCAAACAACAACTTAGAGGCTTTGCCAGATACTAACAATAACAAGGCTAAGAACTTGCCTGATGTGGTGCAATCAAGTCCTGGTTCACCTATGATGGAGAACAGCTCTTCTTCTTCTCCTTCTTTCTCTCCTTCTCTGGCAAATCTGCCTCCCATTCGGGTACGTGTTGATGACAATAATAGTAGGCTTCAACAAGAGAACAAGGTCGGGGGGCTGGTGGAGGAGCAGTTCGCTCAGATGACAGTTGCAAGTGGGGTGAAGCCAGATGATGGGTTGGTGAGTGTGGCTTCTTCTGCAGTGGCTATGCCTGTAATTCCCACAGCTGTGACTATGCCATCTGTTGGGGTGGTTACTACTAGTGACAATGTGATGAATAGAGTTGTTTCTGAGGATGAGAGATCAGATCCTGGGTTTCGGAAGCCCCCTTTACCACTGCAGCTTGTGCAGCCAAGGACTACTGGTGGTGTGGGTTTGCCTTCTCCTGATTCAGTTGCAAGTGATAGTAGTATTGCATCTGCAAATTCTTTCTCCAAGACTGTGTACTATCAAGATCAAGTCCAAGCTGCACTACTAGACAACAAAGTAGTTGCTTTCCCAAATGCCAAGAGTGAAATATCTGATCAGGTGATTCAGGTCCATGGACAAGTACAGGATTCTGGCTATACATTAACCCCACATTTGGATCAAAATAGGCAACTCCAGCAGCAAAAGCCCTTGGTTCATGCCAGCTCTCACTACATCCACCACCCTGCAGCAACAGGTCCAATACCAGTGTCATCATATTACCCAGTTTATGCCCCACCACCACAACAACAACAACTTCACCCTCCAATTGGTCAGCAACAGTACCCTTTTTATGTGATGCCTGTTGGACCCACACAAGTAACACAACCATACAACATGCCCTTGCAGCCCAACATGGCTGACCCAAATGTATTAGCCTCAGGCAGGACCTTAATACCACAAAGTGCTGTTACCTCAGCAGCATACAAGGATGGTACTCCACCTATCTACCCCACCAAGTCAGTTAGCCCTACTATACCTGAGGTGACTTCAAGTGTTTACAAGCCTCCTCCTGTGGCCTCAAATCCTGCATATGCTCCAATACCTCCAAACCAATTTCAGCCACAGTATGTGGGTTTGCCTCAGTTCCATCATCCACTACCACAGTCCATTGCTGTGGCTCCCTCTAGTACTACTACTAATTATGGTTATGAATATGGTGGCCATGTGCAAGACCAAGCATATTACACCCAACAACAAACCACTACTGCTTCATTGCTTCCTCAGTACCAATCCATGACTCCAGCTGCAGCTGCTGCAGCACTTTCAGATGCTTCAAAACAGTTTCCTGCAGAAAACATTCAGCAGCAAAACAGAGCATCACAGCCAGTATGA 2034 0.4744 MDPPPLSAATIISTTTHKHHPDSVESSSPCSRNAETWNDETLPVVPGAKLRLMCSYGGHIMPRPHDKTLCYVGGDTRIVVVDRHSSLKDLCARLSRTILHGRPFTLKYQLPSEDLDSLITVTTDEDLDNMVEEYDRIMAKGTASSRLRVFLFFTKPEATVSMGSLLDDVKSETWFVDALNHSGMLNRVVSDTAAGDSFVNLDGVGGGVSASGSNNNLEALPDTNNNKAKNLPDVVQSSPGSPMMENSSSSSPSFSPSLANLPPIRVRVDDNNSRLQQENKVGGLVEEQFAQMTVASGVKPDDGLVSVASSAVAMPVIPTAVTMPSVGVVTTSDNVMNRVVSEDERSDPGFRKPPLPLQLVQPRTTGGVGLPSPDSVASDSSIASANSFSKTVYYQDQVQAALLDNKVVAFPNAKSEISDQVIQVHGQVQDSGYTLTPHLDQNRQLQQQKPLVHASSHYIHHPAATGPIPVSSYYPVYAPPPQQQQLHPPIGQQQYPFYVMPVGPTQVTQPYNMPLQPNMADPNVLASGRTLIPQSAVTSAAYKDGTPPIYPTKSVSPTIPEVTSSVYKPPPVASNPAYAPIPPNQFQPQYVGLPQFHHPLPQSIAVAPSSTTTNYGYEYGGHVQDQAYYTQQQTTTASLLPQYQSMTPAAAAAALSDASKQFPAENIQQQNRASQPV* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00224 677 PANTHER OS05G0427100 PROTEIN-RELATED 21 505 - -
Lapu4g00224 677 MobiDBLite consensus disorder prediction 342 375 - -
Lapu4g00224 677 MobiDBLite consensus disorder prediction 212 258 - -
Lapu4g00224 677 CDD PB1_UP2 53 152 - -
Lapu4g00224 677 Gene3D - 67 153 - -
Lapu4g00224 677 SMART PB1_new 64 154 IPR000270 GO:0005515
Lapu4g00224 677 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 69 154 - -
Lapu4g00224 677 SUPERFAMILY CAD & PB1 domains 65 162 - -
Lapu4g00224 677 ProSiteProfiles PB1 domain profile. 49 152 IPR000270 GO:0005515
Lapu4g00224 677 Pfam PB1 domain 66 152 IPR000270 GO:0005515
Lapu4g00224 677 MobiDBLite consensus disorder prediction 212 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00224 Lapu-Chr4 2218581 2221441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00224 48 202 MAP Kinase Kinase Kinase AT1G16270 38.125 1.93e-26 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02378 7 40055179 40058574 Lapu4g00224 4 2218581 2221441 ECH
Lapu4g00224 4 2218581 2221441 Lapu4g00224 4 2218581 2221441 ECH