Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03851 ATGAACGCCCAACTCCTTCACCTTCACCACCTTCTCCTCTCTCTCCTCCTCTTCGCAGCCGCATTCTCTCCGGCGGCCACCGCCACAGACGACGCTTCGGCCCCTGCGCCTGACGACGGCGACACCGACTTTATCCGCTCCAGCTGCAACACCACACTCTACCCTGACTTGTGCTTCACCTCCCTCTCCCGCTACGCCAATGCGGTGCAGCAGAACCCCGGCCAGCTGGCGCGCGTGGCCATCGGCGTCAGTCTCTCGAAGGCCCACCGCACCGCGTCCTACATCTCCAACCTCACGCGCGAAGCCGACTACGGAACGAGCGGCTCGCGCGCGGCGCTGGCGCTGCACGACTGCTTCTCGAACCTGGGCGACGCCGTGGACGAAATCCGTGGGTCTCTGAAGCAGATGCGGCAGATTGGGGCAGCCGGCGAGGGCGCCGGATCGTTCCTCTTCCAGATGAGCAACGTGCAAACGTGGATGAGCGCCGCCCTCACCGACGAGGAGACCTGCACGGACGGATTCCAGGACGTAGCGGAATGTCCCGTGAAAGCGGATGTATGCAATCGCGTAACCAACGTCAAGAAGTTCACCAGCAACGCTTTGGCTCTCGTGAACTCCTACGCCAGCAAGGGAATGCCCTGA 642 0.6324 MNAQLLHLHHLLLSLLLFAAAFSPAATATDDASAPAPDDGDTDFIRSSCNTTLYPDLCFTSLSRYANAVQQNPGQLARVAIGVSLSKAHRTASYISNLTREADYGTSGSRAALALHDCFSNLGDAVDEIRGSLKQMRQIGAAGEGAGSFLFQMSNVQTWMSAALTDEETCTDGFQDVAECPVKADVCNRVTNVKKFTSNALALVNSYASKGMP* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03851 213 NCBIfam pectinesterase inhibitor domain 14 207 IPR006501 GO:0004857
Lapu3g03851 213 CDD PMEI-like_3 47 209 - -
Lapu3g03851 213 SMART PMEI_2 40 203 IPR006501 GO:0004857
Lapu3g03851 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 207 IPR035513 -
Lapu3g03851 213 Pfam Plant invertase/pectin methylesterase inhibitor 43 203 IPR006501 GO:0004857
Lapu3g03851 213 FunFam Pectin methylesterase inhibitor 1 40 207 - -
Lapu3g03851 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 207 IPR035513 -
Lapu3g03851 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03851 Lapu-Chr3 62106759 62107984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03851 5 203 Carbohydrate Esterase AT5G53370 25.373 6.57e-13 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03851 3 62106759 62107984 Lapu3g03851 3 62106759 62107984 ECH