Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03332 ATGGTGGAGATTCACGAACAAACCAACCCCTTTGATGAAGAAGAAAATGGAGAAGAAGAAGAAGAGATCAACTATGACCAGCTTAAGAAGAGAATGTGGAAGGATCGGATCCTGTTGCAGAAGCTAAAGGAGGAACGCCCCAAAGAAGAGCCAGACCAAGAAGCAAAACAAGAAGCTTCTAGGCGGAAGAAGATGTCAAGAGCACAAGATTCAATCCTCAAATACATGGTGAAGATCATGGAAGTTTGCAACGCTCAAGGTTTTGTGTATGGAATTATCCCTGAGAAAGGTAAGCCAGTGACTGGCTCTTCTGACAGCTTGCGTGAGTGGTGGAAAGAAAAGGTCAAATTTGATCAAAATGCTCCAGCTGCCATTGCAAAATACATGCCTCTCCTTGAAATAGATGAGTTTGATCCAAATTCCTACATACATCTCCTTAATGACTTGCAAGACACTACTTTAAGTTCACTCCTTTCAGCTCTCATGCAACATTGTATACCTCCTCAAAGAAGATTCCCTCTTGAGAGAGGCTTGCCTCCACCTTGGTGGCCAACAGGGACAGAAACTTGGTGGGGTGAACAAGGCCTTTTGGCCCAAGAACATGGCCCCCCTCCTTATAAGAAGCCCCATGACCTCAAAAAGGTCTGGAAGGTGTCTCTCTTGGCTGCAGTTATCAAACACATATCTCCTAATTTGGATAAACTTAGAAGGTTGGTGACTCAGTCCAAAACTTTGCAAGACAAGATGACAGCCAAGGACACTGCAACTTGGTCCAAGGTTATGAACCAAGAAGAAGCTCTGTTGCAACTAACCAACAAGTGCCTCAAGATATCTCCATCAAAGGAAGATGAAAATGAATGTGAAAGCTCCACTACTACTTCCCACGAAGGGAGTTGTGTGGCTGAGTTGAATGATGACTCCAATTTAGGCGGCATCAGTGAGAAAAGGAAAAGTGTAATTGACTTAGATGCTCCTATTGATAAGTTATATGCTTGTCAATACTATCAGTGTCCAGAAAGTGAAATGGGTATGGGATTTCTAGACAAAAACTCAAGGATGAACCATGAGTCCCATTGTGCTTACAGCGCTAATCAAAGCCCTGCTCTCCTTCATGATCAAGTGTCCAATGACACACAAATTACATGTGAGCATGATTGGATGAACATGGAAGTAGCAAGAGCTAATCAGAATGATAATGACCTTTTTGGACATCTAAATGATCAATTGAGAGATATTGCAGGAAAGACACCAGAAGATTATGGAAGCTTGTGGCTAAATTCCCTCGAAGATCTTGAATTGCACGCTGCACTAGATCAGATTGACATGCACTTGAATCGAAATTCTGAACAAGATACACCCCTAGACCAAGAAATAACCTCAATTTGGGACTTAAAATACAAATAG 1404 0.4224 MVEIHEQTNPFDEEENGEEEEEINYDQLKKRMWKDRILLQKLKEERPKEEPDQEAKQEASRRKKMSRAQDSILKYMVKIMEVCNAQGFVYGIIPEKGKPVTGSSDSLREWWKEKVKFDQNAPAAIAKYMPLLEIDEFDPNSYIHLLNDLQDTTLSSLLSALMQHCIPPQRRFPLERGLPPPWWPTGTETWWGEQGLLAQEHGPPPYKKPHDLKKVWKVSLLAAVIKHISPNLDKLRRLVTQSKTLQDKMTAKDTATWSKVMNQEEALLQLTNKCLKISPSKEDENECESSTTTSHEGSCVAELNDDSNLGGISEKRKSVIDLDAPIDKLYACQYYQCPESEMGMGFLDKNSRMNHESHCAYSANQSPALLHDQVSNDTQITCEHDWMNMEVARANQNDNDLFGHLNDQLRDIAGKTPEDYGSLWLNSLEDLELHAALDQIDMHLNRNSEQDTPLDQEITSIWDLKYK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03332 467 Gene3D - 54 131 IPR023278 GO:0003700|GO:0005634
Lapu3g03332 467 Gene3D - 136 274 IPR023278 GO:0003700|GO:0005634
Lapu3g03332 467 FunFam Ethylene insensitive 3 family protein 54 135 - -
Lapu3g03332 467 FunFam Ethylene insensitive 3-like 1 138 274 - -
Lapu3g03332 467 MobiDBLite consensus disorder prediction 41 65 - -
Lapu3g03332 467 Pfam Ethylene insensitive 3 27 265 IPR047091 GO:0003700
Lapu3g03332 467 MobiDBLite consensus disorder prediction 1 25 - -
Lapu3g03332 467 SUPERFAMILY DNA-binding domain of EIN3-like 143 268 IPR023278 GO:0003700|GO:0005634
Lapu3g03332 467 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 9 383 IPR006957 GO:0003700|GO:0005634
Lapu3g03332 467 Coils Coil 11 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03332 Lapu-Chr3 56610483 56611886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03332 1 400 EIL Transcription Factor Family AT5G10120 53.555 1.72e-139 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lapu3g03332 EIN3 5.8e-116 No_clan