Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02716 ATGGCGAGAAACTGGTTGTTTCGATCTTTGGCGCTTCGACATGCGATAAAGAATAGGTTTCGCCCAATCGTCTTCAACGCTCACCACCGCTTTCTCTCACTCCCATCCAAACCCTCTCTCTTTGCCACCGCCATCGCCTCCTCTCAGCTCTCTCTCCTCCCATCCTTCCACCACTCCCGCTCCCTCTCCTCCGCCGCAGGTCCTTCCGATGTTGTCATTGTTAATTCAGAGGAAGAGTTCAACAATATACTTACCAAAGTCCAAAATGACTCGTTGCACGCCATCTTCTATTTCACTGCGGTTTGGTGTGGACCTTGCAGATTTATTTCCCCTATAGTTGGGGAGCTCAGTAAGAAGTATCCTCATGTGACAACATATAAGATTGACATAGATCAGGAAGCAATTCAGGGCACATTGGGCAAATTGCAGATTACATCTGTGCCTACACTTCATTTCTTTCGGAATGGGAAAAAGGCCGATGAACTTATAGGTGCTGATGTTGCACGATTGAACAATATCACAGAGAAACTCTTCAAGAAGGACTGA 546 0.467 MARNWLFRSLALRHAIKNRFRPIVFNAHHRFLSLPSKPSLFATAIASSQLSLLPSFHHSRSLSSAAGPSDVVIVNSEEEFNNILTKVQNDSLHAIFYFTAVWCGPCRFISPIVGELSKKYPHVTTYKIDIDQEAIQGTLGKLQITSVPTLHFFRNGKKADELIGADVARLNNITEKLFKKD* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02716 181 FunFam Thioredoxin 68 179 - -
Lapu3g02716 181 Pfam Thioredoxin 72 167 IPR013766 -
Lapu3g02716 181 PRINTS Thioredoxin family signature 94 102 - -
Lapu3g02716 181 PRINTS Thioredoxin family signature 143 154 - -
Lapu3g02716 181 PRINTS Thioredoxin family signature 102 111 - -
Lapu3g02716 181 Gene3D Glutaredoxin 67 179 - -
Lapu3g02716 181 ProSiteProfiles Thioredoxin domain profile. 47 179 IPR013766 -
Lapu3g02716 181 PANTHER THIOREDOXIN-LIKE PROTEIN 1 71 178 - -
Lapu3g02716 181 CDD TRX_family 78 166 - -
Lapu3g02716 181 SUPERFAMILY Thioredoxin-like 61 169 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02716 Lapu-Chr3 49792593 49797601 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02716 3 49792593 49797601 Lapu3g02716 3 49792593 49797601 ECH