Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02705 ATGAGATTCTTAGCGGTGTGTTTTGTCTTCTTATTGCTGGTGCTACAAGTAGAAGACACCACATGTTTCACTTTCAGGAGGGAGAAAAAGCTGTCAGAATTCAGGACCAAACTTGATCGAAAGATTCAAGATTTAGCTACAACTCCTTTGGCATCACCACCTGCTTCATCAGAAACAAAGAGGAGTGGGAGAGTGTTGTACGTGAGTGAGTATGGTGCGGATCCAAGTGGGAATGAAGAGAGTAGTGATGCCATTTTGAAAGCAGTGGAAGATGCTTTTGGTTTGCAGAAGGGTTATGAGATGGTAGCAGGGGTGAATGACCTTGGAGGGGTTGTGATTGATTTGGAAGGTGGAAACTACAAAATCAGCAAACCCATTACATTCCCTTCTGGTATTGGCAATGTTGTGGTAAAAGGAGGAACGTTGAGAGCATCTGATAAATTTCCTGGTGATCGACATCTAATTGAGTTATGGTCATCAAAGTCCGAGAAAAATGGCAATGGTGGAATTTACTATGAAGACGTAACTTTCAGGGACATTCTCTTTGATTCGAGCTACAAAGGAGGAGGGATATTCATTGTTGATTCTGCCAGAATCCGTATCAGCAATTGCTTCTTCCTTCACTTCACCACAGAAGGAATTCTGGTCCACCAAGGACACGAGACCTTCATCACAAGTTGCTTTCTTGGGCAACACTCAACCGTGGGCGGAGACAAAGATGAGAAGAACTTCTCAGGGGTGGCCATTGATCTTGCGAGTAATGATAATGCAATCACAGATGTTGCAATTTTCTCAGCAGCCATTGGTGTTGTTCTAAGGGGTCAAGCTAACATTCTAACTGGGGTGCATTGTTATAACAAGGCAACAGGTTTTGGTGGCATAGGGATATTAGTGAAATTGCCAGGTAATTCTCTAACTAGAATTGACAACTGTTATCTGGATTACACTGGAATAGTCATGGAAGATCCTGTTCAAGTTCATGTCACAAATGGGTTGTTTCTAGGGGATGCTAATATTGTGTTGAAGTCTATTAAAGGTCAAATTTTGGGCCTAAATATAGTGGATAACATGTTCAATGGTGACCCCAAAAGGAAGGTTCCTATTGTAAGTCTAGATGGGGAATTCAGTAGCATTGATCAAGTGGTGGTTGATCGCAACCATGTGAATGGCATGAGCTTGAGATCAACAGTTGGGAAGTTAACTGCCAGTGGAAATGGCACAAAGTGGGTGGCTGATTTTTCATCGGTCTTGGTGTTTCCTAAGAGAATTAGTCATTTTCAATATTCATTTTATGCTCAAGATGAGCCTAAATTTGTAGCATTTTCTGTGACCAATGTATCAGATAATGTTGTTGTTGTAGAGAGTGAGAAAGAAGCTAAAGGGTTTGTCTCCTTCACAGTTGAACAATAA 1410 0.4149 MRFLAVCFVFLLLVLQVEDTTCFTFRREKKLSEFRTKLDRKIQDLATTPLASPPASSETKRSGRVLYVSEYGADPSGNEESSDAILKAVEDAFGLQKGYEMVAGVNDLGGVVIDLEGGNYKISKPITFPSGIGNVVVKGGTLRASDKFPGDRHLIELWSSKSEKNGNGGIYYEDVTFRDILFDSSYKGGGIFIVDSARIRISNCFFLHFTTEGILVHQGHETFITSCFLGQHSTVGGDKDEKNFSGVAIDLASNDNAITDVAIFSAAIGVVLRGQANILTGVHCYNKATGFGGIGILVKLPGNSLTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDANIVLKSIKGQILGLNIVDNMFNGDPKRKVPIVSLDGEFSSIDQVVVDRNHVNGMSLRSTVGKLTASGNGTKWVADFSSVLVFPKRISHFQYSFYAQDEPKFVAFSVTNVSDNVVVVESEKEAKGFVSFTVEQ* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02705 469 Gene3D - 68 461 IPR012334 -
Lapu3g02705 469 FunFam Polygalacturonase QRT3 68 464 - -
Lapu3g02705 469 SUPERFAMILY Pectin lyase-like 64 393 IPR011050 -
Lapu3g02705 469 PANTHER POLYGALACTURONASE QRT3 10 469 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02705 Lapu-Chr3 49669773 49672737 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02705 3 49669773 49672737 Lapu3g02705 3 49669773 49672737 ECH