Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02567 ATGGAAGAAGAAGAAGAAGAGGGGCATGCCATGCTCATCACTAACCTTCACCATCACCATTTCTCTCACACTCTCTCACCTTCTTTCACCCTTCAACCTCACCATCACACTCACCCTCCATTCTCTCAACAACTCCCCAGATGCTCCTTCCTTGACATTGATGATTACTCCGTAGATGACTTCTGTGGCCTTGTAATGGCAGCTGGAAAGTGTGGAAGTTTCAGGATGATGGAACCTCTAAAGCGTGCATCTAAGAAGTCTCGAAGAGACAGGAGCCGAGGAAAATCTTCTGGAAGGTCATCCAGTGATGAAGCCATGGAACAACAAATTTGGAAAGATTTGCCCGAGGATCTCCTTGAGCCTGTGATTGCACGACTTCCCATTGCAACATTTTTCCGCTTCCGCTCTGTATGCCAGCGATGGAATTCCTTGCTGACTTCTCAAAGTTTTTCTCAGCATTGTGCTCAAGTCCCACAAGCAAACCCATGGTTTTACACTGTCACTCATGAACATGCAAATTCTGGAGCCATGTATGACCCTTCTACGAAGAAGTGGTACCATCCTACTACATCAGCACTACCTGCAGAGTTGATAGTTTTGCCAGTGGCTTCTGCAGGGGGTCTAGTTTGCTTTCTTGACGTATTTAGTCAAAATTTATATGTTTGTAACCCATTGACTCAATCCTTAAAGGAGTTACCAGCTCGGTCAGTTAGAGTTGGGTCTCGCTCTGCTGTAGGAATGACAGTAAACGGGAATTCAACTGGTGGTGGCTACAGGATCCTATTGGTGGGTTGTGATGGACAATATGAAATTTATGACTCAGTAACAAAGTTATGGAGCTATCCAGGAAACACGCCTGCAGATATTAAGCTGCCACTGTCACTCAATTTTAGGTCACCAGCCATTTCTATTGACAGCACCCTCTACTTCATGCATTCAGATCCCGAAGGGATTATTTCCTATGATATGGCAACTGGGGTGTGGATGCAATACATAATCCCAGCGCCATTGCATCTGACTGACCACACCCTGGCGGAGTGTGATGGCCGGATATTGCTTGTGGGGTTGCTCACAAAAAATGCAGCCACCTGTATATGCATATGGGAGCTGCAGAAGATGACGTTCTTGTGGAAGGAGGTTGACAGAATGCCAAACGTGTGGTGCTTGGACTTTTATGGGAAGCACGTTAGAATGACTTGCTTGGGAAACAAAGGCTTGCTCATGTTATCCATGAGATCAAGACAAATGAATCGATTGGTTACATACAACATAGCAAGTAAGGAATGGGTGAAGGTTCCTGGGTGTGTGGTGCCACAGGGAAGAAAACGGCAATGGATAGCACATGGTACTGCATTTTATCCGTGCCTCACTGCAACGGCTTGA 1383 0.4599 MEEEEEEGHAMLITNLHHHHFSHTLSPSFTLQPHHHTHPPFSQQLPRCSFLDIDDYSVDDFCGLVMAAGKCGSFRMMEPLKRASKKSRRDRSRGKSSGRSSSDEAMEQQIWKDLPEDLLEPVIARLPIATFFRFRSVCQRWNSLLTSQSFSQHCAQVPQANPWFYTVTHEHANSGAMYDPSTKKWYHPTTSALPAELIVLPVASAGGLVCFLDVFSQNLYVCNPLTQSLKELPARSVRVGSRSAVGMTVNGNSTGGGYRILLVGCDGQYEIYDSVTKLWSYPGNTPADIKLPLSLNFRSPAISIDSTLYFMHSDPEGIISYDMATGVWMQYIIPAPLHLTDHTLAECDGRILLVGLLTKNAATCICIWELQKMTFLWKEVDRMPNVWCLDFYGKHVRMTCLGNKGLLMLSMRSRQMNRLVTYNIASKEWVKVPGCVVPQGRKRQWIAHGTAFYPCLTATA* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02567 460 FunFam F-box only protein 6 111 150 - -
Lapu3g02567 460 FunFam F-box only protein 6 161 447 - -
Lapu3g02567 460 ProSiteProfiles F-box domain profile. 108 153 IPR001810 GO:0005515
Lapu3g02567 460 SMART fbox_2 114 154 IPR001810 GO:0005515
Lapu3g02567 460 MobiDBLite consensus disorder prediction 80 107 - -
Lapu3g02567 460 Gene3D - 111 147 - -
Lapu3g02567 460 PANTHER BNACNNG10540D PROTEIN 82 436 - -
Lapu3g02567 460 SUPERFAMILY F-box domain 100 156 IPR036047 GO:0005515
Lapu3g02567 460 Gene3D - 148 451 IPR015915 GO:0005515
Lapu3g02567 460 Pfam F-box domain 111 150 IPR001810 GO:0005515
Lapu3g02567 460 SUPERFAMILY Galactose oxidase, central domain 136 440 IPR011043 -
Lapu3g02567 460 CDD F-box_AtFBW1-like 113 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02567 Lapu-Chr3 47938581 47941767 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02567 3 47938581 47941767 Lapu3g02567 3 47938581 47941767 ECH