Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02537 ATGGAGAACATTCTGGGTCTTATCAAACTTCGTATCAAAAGAGGAACTAATCTCAAAGCTTGCGACACTCGTACCAGTGACCCCTATGTCTTCGTCACCATGGCCGAACAGCAACTGAAAACTAGTGTTGTAAGAGACACCTGTAATCCTGAGTGGAATGAAGAATTGACACTTTATGTAACAGATGTTAACATTCCGATACTTCTGACAGTTACAGACAAAGACACTTTGACGGTAGATGACAACATGGGGGATGCAGAAATAGACTTAAAGCCATATCTTCAGTGTGTGAAGATGGAGTTGAGCGATCTCCCAGAGGGTCATATAGTGAAGAAGGTTCAACCAGATAGGACTAACTGCCTTGCAGAAGAGAGCAACTGCATATGGAAAAATGATAAACTCATCCAAGAGATGACTTTAAGATTGAGAAATGTCAAGTCTGGGGAAATAACTGTGGAAATTGGGTGGGTTACTCTTCCAGATTCAAAAGGCTTATCACAAGCTGAGTTTTAG 513 0.4133 MENILGLIKLRIKRGTNLKACDTRTSDPYVFVTMAEQQLKTSVVRDTCNPEWNEELTLYVTDVNIPILLTVTDKDTLTVDDNMGDAEIDLKPYLQCVKMELSDLPEGHIVKKVQPDRTNCLAEESNCIWKNDKLIQEMTLRLRNVKSGEITVEIGWVTLPDSKGLSQAEF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02537 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lapu3g02537 170 Pfam C2 domain 7 92 IPR000008 -
Lapu3g02537 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 100 IPR035892 -
Lapu3g02537 170 Gene3D C2 domain 4 169 IPR035892 -
Lapu3g02537 170 SMART C2_3c 7 102 IPR000008 -
Lapu3g02537 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02537 Lapu-Chr3 47513087 47517820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02537 38 167 C2H2 Transcription Factor Family AT1G70790 53.030 2.44e-46 147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02537 3 47513087 47517820 Lapu3g02537 3 47513087 47517820 ECH
Lapu3g02537 3 47513087 47517820 Lapu4g00253 4 2533033 2535579 ECH