Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02536 ATGCTACTGCGTTTACCTTATCTCCCGAAGCTTGATTTTTATTCAAACAAAGCAAGAGCGCCAAGAAAACAAACAATGGCTGCTTCTACTTCTCCAAACTTCCCAACATCTTTGCATAAGAACACTCACAAAACAAAGTTTCCTTCTTCAGCAGGGAAGAAAACACTGCATAACAAAGTTGGGTTCTCATTTTCTGTGCCATTCAATAAATCCATACGTGTGAAATCCTTTGGCACTGCGAAGTATGATGAAGTTGTGGTGGATGAAGAGTTGGACAAGATTAGGAGGCTTCAGAATGGTTCAGATGTTAGAGGAGTGGCATTGGAAGGTGAGAAAGGCAGAAAAGTTGACCTTACTCCTCCTGCTGTGGAGGCAATATCAGAGAGTTTTGGGGAGTGGGTTATCAATGGTTTAGAGAAGGAACGAGGATACCCTGTAGAGAATGTGAGAGTGTCTCTTGGACGTGACCCTCGAATTACAGGGTCGAAATTGAGTGTTGCAGTATTTGCAGGTCTTGCTCGAGCAGGTTGCATGGTGTTTGACATGGGACTAGCTACCACACCAGCTTGTTTCATGAGCACATTATTGCCTCCATTTGCCTATGATGCTTCAATCATGATGACAGCGTCCCACTTGCCTTACACTCGAAATGGTCTGAAATTTTTTACTAAGAAAGGTGGACTGACTTCAACAGAGGTGGAGGAAATATGTGATAAAGCTGCTCGAAAATATGCAAATAGGATGGCAAAGGTGTCTACTTTGCTTAGTGTTCTTCCAACAAAAGTTGATTTTATGAGCACTTATGCAATGCACCTACGAGAAATCATCAAGGAGAGAATCAATCATCCTCTGCATTATGACACTCCACTTCGGGGATTTCAGATTATAGTAAATGCTGGAAACGGGTCAGGAGGGTTTTTCACATGGGATGTGTTGGACAAACTTGGTGCAGATACCTTTGGGTCTCTGCATTTAAACCCTGATGGGATGTTTCCGAATCACATTCCCAACCCTGAGGATAAAACTGCCATGGCACTCACCAGAGCAGCAGTGTTAGAAAACTCAGGTGATCTTGGAATAGTTTTCGACACCGATGTGGACAGAAGTGGGGTGGTTGATGACAAAGGGAACCCTATAAATGGTGACAAACTCATTGCTCTCATGTCTGCCATTGTGTTAAGGGAACATCCAGGATCAACTATAGTGACTGATGCACGTACAAGTATGGCACTCACCAGATTCATAACTGATAGAGGGGGTCACCATTGCCTATACCGCGTAGGATACAGAAATGTCATTGACAAGGGAGTTCAACTTAATAGTGATGGAATTGAAACACATCTTATGATGGAAACATCTGGCCATGGTGCTCTCAAAGAAAACCATTTCCTTGATGATGGGGCTTACATGGTGGTGAAAATTATCATTGAAATGGTACGGATGAAGCTTGCGGGATCAAATGAAGGGATTGGCAGTCTTATAAAAGATCTTGAAGAACCCTATGAATCAGTAGAGCTTAGGATAAACATCATCTCTGAACCACGACATGCTAAAGCTAAAGGATCAGAGGCCATTCAAACATTTAGAAACTACATTGAGGAAGGGAGGCTCAGAGGGTGGGAGTTAGACTCATGTGGTGATTGTTGGGTGAGTGAAGGGTGTCTTGTAGATACAAATGACGCCCCAGCTCCCATTGATGCTCAAATGTACAGGGCAAAAGTGTCAAACGATAGTGATGGACAGCATGGTTGGGTTCACATGAGGCAGAGTATTCACAACCCTAACATTGCTGTGAACCTGCAATCATCTGTTCAGGGAGGTTGCTTGTCTATGGCACGAGCTTTTAGAGATGAGTTTCTCAAAGCAAGTGGAGTTTATACATTCCTTGACATTACTCAAGTTGATAACTTTACTGAAAATGGATCCATAGCCTGA 1935 0.4305 MLLRLPYLPKLDFYSNKARAPRKQTMAASTSPNFPTSLHKNTHKTKFPSSAGKKTLHNKVGFSFSVPFNKSIRVKSFGTAKYDEVVVDEELDKIRRLQNGSDVRGVALEGEKGRKVDLTPPAVEAISESFGEWVINGLEKERGYPVENVRVSLGRDPRITGSKLSVAVFAGLARAGCMVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGGLTSTEVEEICDKAARKYANRMAKVSTLLSVLPTKVDFMSTYAMHLREIIKERINHPLHYDTPLRGFQIIVNAGNGSGGFFTWDVLDKLGADTFGSLHLNPDGMFPNHIPNPEDKTAMALTRAAVLENSGDLGIVFDTDVDRSGVVDDKGNPINGDKLIALMSAIVLREHPGSTIVTDARTSMALTRFITDRGGHHCLYRVGYRNVIDKGVQLNSDGIETHLMMETSGHGALKENHFLDDGAYMVVKIIIEMVRMKLAGSNEGIGSLIKDLEEPYESVELRINIISEPRHAKAKGSEAIQTFRNYIEEGRLRGWELDSCGDCWVSEGCLVDTNDAPAPIDAQMYRAKVSNDSDGQHGWVHMRQSIHNPNIAVNLQSSVQGGCLSMARAFRDEFLKASGVYTFLDITQVDNFTENGSIA* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02536 644 Gene3D - 294 372 - -
Lapu3g02536 644 Gene3D - 98 253 - -
Lapu3g02536 644 PANTHER PHOSPHOHEXOSE MUTASE 90 637 - -
Lapu3g02536 644 FunFam phosphomannomutase/phosphoglucomutase isoform X1 294 371 - -
Lapu3g02536 644 SUPERFAMILY Phosphoglucomutase, first 3 domains 277 378 IPR016055 GO:0005975|GO:0016868
Lapu3g02536 644 FunFam phosphomannomutase/phosphoglucomutase isoform X1 98 253 - -
Lapu3g02536 644 SUPERFAMILY Phosphoglucomutase, first 3 domains 99 246 IPR016055 GO:0005975|GO:0016868
Lapu3g02536 644 SUPERFAMILY Phosphoglucomutase, first 3 domains 380 481 IPR016055 GO:0005975|GO:0016868
Lapu3g02536 644 Gene3D - 373 496 - -
Lapu3g02536 644 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 96 245 IPR005844 GO:0005975|GO:0016868
Lapu3g02536 644 PRINTS Phosphoglucomutase/phosphomannomutase family signature 203 217 IPR005841 GO:0005975|GO:0016868
Lapu3g02536 644 PRINTS Phosphoglucomutase/phosphomannomutase family signature 292 311 IPR005841 GO:0005975|GO:0016868
Lapu3g02536 644 PRINTS Phosphoglucomutase/phosphomannomutase family signature 356 371 IPR005841 GO:0005975|GO:0016868
Lapu3g02536 644 PRINTS Phosphoglucomutase/phosphomannomutase family signature 327 340 IPR005841 GO:0005975|GO:0016868
Lapu3g02536 644 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 290 376 IPR005845 GO:0005975
Lapu3g02536 644 FunFam Phosphomannomutase/phosphoglucomutase isoform B 373 494 - -
Lapu3g02536 644 CDD PMM_PGM 97 619 - -
Lapu3g02536 644 MobiDBLite consensus disorder prediction 22 52 - -
Lapu3g02536 644 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 380 480 IPR005846 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02536 Lapu-Chr3 47506319 47509409 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02536 3 47506319 47509409 Lapu3g02536 3 47506319 47509409 ECH