Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02529 ATGGCAAAGCGCTTGATTCCCACCTTCAATCGCATTCTCGTAGAGAAAATTGTTCCTCCCTCCAAGACTAGCGCTGGCATTCTCCTTCCTGAGAAGTCCTCCCAGCTTAATTCCGGTAAGGTGATAGCTGTTGGACCTGGATCACGAGACAAGGCCGGGAACTTCATTCCGGTGTCTCTCAAGGAAGGTGATCGCGTTCTCTTGCCCGAGTACGGTGGCACCCAAATCAAGCTCGATGACAAAGAGTATGTGTGGTTCCATTTGTTTAGGGATGAGGACATATTGGGCATTCTGCACGAATGA 303 0.4983 MAKRLIPTFNRILVEKIVPPSKTSAGILLPEKSSQLNSGKVIAVGPGSRDKAGNFIPVSLKEGDRVLLPEYGGTQIKLDDKEYVWFHLFRDEDILGILHE* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02529 100 FunFam 10 kDa chaperonin, mitochondrial 1 100 - -
Lapu3g02529 100 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0044183
Lapu3g02529 100 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0044183
Lapu3g02529 100 PRINTS 10kDa chaperonin signature 85 98 IPR020818 GO:0005524|GO:0006457|GO:0044183
Lapu3g02529 100 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Lapu3g02529 100 CDD cpn10 4 98 IPR020818 GO:0005524|GO:0006457|GO:0044183
Lapu3g02529 100 Gene3D GroES chaperonin 1 100 IPR037124 GO:0006457
Lapu3g02529 100 SMART Cpn10_2 4 98 IPR020818 GO:0005524|GO:0006457|GO:0044183
Lapu3g02529 100 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 97 IPR020818 GO:0005524|GO:0006457|GO:0044183
Lapu3g02529 100 Pfam Chaperonin 10 Kd subunit 5 97 IPR020818 GO:0005524|GO:0006457|GO:0044183
Lapu3g02529 100 SUPERFAMILY GroES-like 3 99 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02529 Lapu-Chr3 47421693 47424145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02529 3 99 Calmodulin-binding Proteins AT5G20720 34.694 2.43e-10 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02529 3 47421693 47424145 Lapu3g02529 3 47421693 47424145 ECH