Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02528 ATGGACCCTAATGCCTGCTCTATGCAGCATTCTCATTGCCTAGAGATGACCATGGAAGTGCACCAAGTTGTTCCACCACCCCACAAGACCACCCTCCACAAACTCAAGGCCAGGCTCAAGGAAACCTTTTTCCCTGATGACCCTCTGCGCCAATTCAAGGGACAGCCACTCAAGACAAAACTAACTCTTGCAGCTCAATATCTGTTCCCTATTCTTCAATGGGGTCCTAAGTACAGCCTCAAACTCTTCAAGTCTGACCTTGTTTCTGGCCTCACTATTGCTAGCTTGGCCATCCCACAGGGAATCAGTTATGCTAAGCTTGCAAATCTTCCTCCAATTGTGGGACTTTATTCCAGTTTCGTCCCACCACTTGTTTATGCTGTTCTTGGAAGCTCAAGGGACCTAGCTGTAGGACCTGTGTCTATTGCTTCTCTTGTGCTGGGATCGATGCTAAGACAAGAAGTATCTCCCACAGCAGACCCAGTTCTGTTTCTTCAACTAGCTTTTACTTCGACCTTTTTTGCTGGTCTCTTTCAAGCTTCACTTGGAATCCTAAGGCTTGGTTTTATAATTGATTTTCTATCCAAGGCCATTCTGATTGGGTTCATGGCTGGAGCTGCTATGATTGTCTCCCTGCAACAGCTTAAGAGTCTGCTTGGAATCTCACATTTCACTAATCAGATGGGGCTGGTTCCTGTTATGACTTCTGTTTTCCATAATATACACGAGTGGTCATGGCAAACAATATTGATGGGCATTTGCTTTCTACTGCTACTACTATTAGCAAGACACGTTAGCATTAAAAAACCAAAGTTATTTTGGGTCTCAGCTGGAGCTCCTCTTATGTGTGTTATCATTTCCACCCTCATTGTTTTTGCAATTAAGGCTCAAAATCATGGCATTAGTGTGATTGGCAAATTGCAACAAGGCATAAATCCTCCTTCATGGAATATGTTACGCTTCCATGGAAGTCACTTAGGCCTAGTTATGAAAACAGGGCTTATCACTGGCATTTTGTCTCTCACTGAAGGTATTGCAGTAGGAAGAACATTTGCAGCTTTAAAAAACTACAAAGTGGATGGAAACAAGGAAATGATGGCAATTGGGCTTATGAATATGGTTGGCTCCTCCACTTCCTGTTATGTTACAACAGGTGCTTTCTCTCGGTCAGCTGTTAACAATAACGCTGGTGCAAAAACAGCTGTGTCAAATGTAGTGATGTCTGTGACAGTCATGGTAACACTCCTTTTTCTGATGCCATTGTTCCAATACACACCTAATGTTGTGTTGGGTGCAATCATAGTCACTGCAGTAATTGGCCTCATTGATCTCCCTGCTGCTTATAACATTTGGAAGATTGACAAATTCGATTTCCTTGTGATGTTGGCTGCTTTCATGGGTGTTCTTTTTATCTCTGTCCAAGGAGGCCTTGGTCTTGCTGTGGGGTTATCAACTTTCAAGATACTGATGCAAATTACAAGGCCGAAGACAGTAATGTTGGGGAAGATTCCAGGAACAGACATATATAGAAATCTTCATCAATATAAGGAAGCTGTGAGAATACCTGGTTTTCTTATTTTAAGCATTGAGGCTCCCATCAATTTTGCTAACATCACATACCTTAATGAGAGAACATTACGATGGATAGAAGAAGAGGAAGACAACATAAAAGATCAATTAAGCCTTCGATTCTTAATATTGGAAATGTCAGCTGTGAGTGCCATTGATACAAGTGGAATCTCACTTTTCAAAGAGTTGAAATCAACGTTGGAAAAGAAGGGTGTTGAGCTTGTGTTGGTCAATCCTCTGGCTGAGGTCATTGAGAAGCTGAAAAAAGTTGATGAAGCTAGTGATTTCATGCAAGCAGATAGCCTTTTCTTGACAGTTGGAGAGGCTGTAGCTTCTCTTTCATCAACAATGAAGGCTCAATCATCAACCTTTCTAGGAGGGGCGCACACAATTGTGTAA 1968 0.4217 MDPNACSMQHSHCLEMTMEVHQVVPPPHKTTLHKLKARLKETFFPDDPLRQFKGQPLKTKLTLAAQYLFPILQWGPKYSLKLFKSDLVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPTADPVLFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAMIVSLQQLKSLLGISHFTNQMGLVPVMTSVFHNIHEWSWQTILMGICFLLLLLLARHVSIKKPKLFWVSAGAPLMCVIISTLIVFAIKAQNHGISVIGKLQQGINPPSWNMLRFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALKNYKVDGNKEMMAIGLMNMVGSSTSCYVTTGAFSRSAVNNNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDLPAAYNIWKIDKFDFLVMLAAFMGVLFISVQGGLGLAVGLSTFKILMQITRPKTVMLGKIPGTDIYRNLHQYKEAVRIPGFLILSIEAPINFANITYLNERTLRWIEEEEDNIKDQLSLRFLILEMSAVSAIDTSGISLFKELKSTLEKKGVELVLVNPLAEVIEKLKKVDEASDFMQADSLFLTVGEAVASLSSTMKAQSSTFLGGAHTIV* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02528 655 ProSiteProfiles STAS domain profile. 514 636 IPR002645 -
Lapu3g02528 655 FunFam Sulfate transporter 31 494 639 - -
Lapu3g02528 655 Gene3D STAS domain 494 639 IPR036513 -
Lapu3g02528 655 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Lapu3g02528 655 CDD STAS_SulP_like_sulfate_transporter 515 614 - -
Lapu3g02528 655 NCBIfam sulfate permease 70 632 IPR001902 GO:0016020|GO:0055085
Lapu3g02528 655 SUPERFAMILY SpoIIaa-like 520 636 IPR036513 -
Lapu3g02528 655 PANTHER SULFATE TRANSPORTER 32 637 IPR001902 GO:0016020|GO:0055085
Lapu3g02528 655 Pfam Sulfate permease family 83 463 IPR011547 GO:0016020
Lapu3g02528 655 Pfam STAS domain 515 632 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02528 Lapu-Chr3 47388561 47397313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02528 15 643 Inorganic Solute Cotransporters AT3G15990 66.719 0.0 857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02528 3 47388561 47397313 Lapu3g02528 3 47388561 47397313 ECH