Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02458 ATGGACCCAAACGACAACGACGGCCTTCTCCGTGAGTTCCCTGGCCTCTTCCGCGCCTACAAAGACGGCCGCGTCGAGCGTCTCCTCGGCACCGAAACCACTCCTCCCGGTACCGACCCCACCACCGCCGTTCAATCCAAAGACGTCACCGTAAACCCCGAAACCACCGTCGCCGTCCGCCTCTACCTCCCTCCCACCGCTTCCTCCTCCTCCCACAAGCTCCCTATTCTCATCTACATCCACGGCGGCGCCTTCTGCGTTTGCACCCCCTTCAACCCCGCCTACCACAACCATCTCAACGTTGTCTGTGCCGCAGCCGACGTCCTCGTCGCCTCCGTTCACTACCGCCTCGCCCCGGAGCACCCCCTCCCCGCCGCCTACCACGACGCATGGGAGGCCTTCCAGTGGGTCGCCTCTCACGCTGGCGGTGCTGGACCGGAGCCCTGGCTCAACGCCCACGCCGATCCAGGAAATGTGTTCCTCGCCGGTGACAGCGCCGGCGGCAACATCGCGCACAGCGTGGCGATGCGAGGCACTGCGGAAGGGTTCGGGGGATTGAACCTGCAAGGGATGGTGCTGCTTCACCCATTCTTCGGGAATGATAAAAAGGACGACCTTGTAGAGTTTCTGTACCCTACGTACGGAGGATTAAGCGACACCTTGATCCACCCCCCGCTGGATCCGAAACTGTCGGATCTGGCGTGTCCGAGGGTGCTGATGTTCTTGTCAGAGAAAGATTTTCTGAGGGACAGAGGGTGCAGCTATTACGAAGCGCTGAAGAAAAGTGGGTGGAAGGGTGAGGTGGAGAAGGTGGAGTTCGAGGGAGAGGACCATGTGTTTCATCTCTTTGACCGCACTAAGCAAAACTCCTTGGATCTCGTTAAACAATTTGCCGCATTCTTGAAGCAAATCCCCTCGCGCTGCTGA 927 0.5987 MDPNDNDGLLREFPGLFRAYKDGRVERLLGTETTPPGTDPTTAVQSKDVTVNPETTVAVRLYLPPTASSSSHKLPILIYIHGGAFCVCTPFNPAYHNHLNVVCAAADVLVASVHYRLAPEHPLPAAYHDAWEAFQWVASHAGGAGPEPWLNAHADPGNVFLAGDSAGGNIAHSVAMRGTAEGFGGLNLQGMVLLHPFFGNDKKDDLVEFLYPTYGGLSDTLIHPPLDPKLSDLACPRVLMFLSEKDFLRDRGCSYYEALKKSGWKGEVEKVEFEGEDHVFHLFDRTKQNSLDLVKQFAAFLKQIPSRC* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02458 308 Pfam alpha/beta hydrolase fold 77 281 IPR013094 GO:0016787
Lapu3g02458 308 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 IPR033140 -
Lapu3g02458 308 PANTHER ARYLACETAMIDE DEACETYLASE 13 286 - -
Lapu3g02458 308 Gene3D alpha/beta hydrolase 16 304 IPR029058 -
Lapu3g02458 308 SUPERFAMILY alpha/beta-Hydrolases 18 304 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02458 Lapu-Chr3 46495256 46496917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02458 12 302 Carbohydrate Esterase AT3G48700 40.752 2.09e-78 240
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02458 3 46495256 46496917 Lapu3g02458 3 46495256 46496917 ECH
Lapu2g00531 2 4557964 4560292 Lapu3g02458 3 46495256 46496917 PCT