Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02291 ATGTCCGCGGAGAAGGAGAGAGAGACTCAAGTTTACATCGCCAAGCTTTCTGAGCAAGCTGAGAGATATGAAGAAATGGTTGAATGCATGAAGGCGATTGCAAAACTTGATCTAGAACTGACCGTGGAAGAGAGGAACCTGCTCTCGGTGGGATATAAAAATGTGATTGGTGCACGACGAGCTTCTTGGCGCATTATGTCATCAATTGAACAGAAGGAAGAGTCTAAAGGAAATGAGAGCAATGCAAAAATGATCAAGAATTACCGTCAAAAGGTAGAAGAGGAACTCTCCAAAATTTGCAGCGATATTCTGTCAATTATTGACAAGCATCTCGTTCCTTCTTCCACCTCAGGAGAAGCCACCGTTTTCTACTATAAGATGAAAGGTGACTATTATCGATATCTAGCTGAGTTCAAGACCGACCAAGAAAGAAAGGAGGCAGCTGAGCAATCACTGAAGGGATATGAGGCTGCTTTAGCTGCAGCAAACACAGATCTTCCATCAACACATCCAGTTCGTCTTGGACTTGCACTCAACTTCTCAGTCTTCTATTACGAGATAATGAACTCTCCTGAAAGGGCGTGCCATTTGGCTAAGCAAGCTTTCGATGAAGCAATTGCTGAGTTAGACACGTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGCTGTTGAGAGACAATCTCACTCTCTGGACCTCTGATTTACCCGAGGATGGAGTGAAAACCTGA 738 0.439 MSAEKERETQVYIAKLSEQAERYEEMVECMKAIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNAKMIKNYRQKVEEELSKICSDILSIIDKHLVPSSTSGEATVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAALAAANTDLPSTHPVRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGVKT* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02291 245 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Lapu3g02291 245 Coils Coil 145 165 - -
Lapu3g02291 245 Coils Coil 13 33 - -
Lapu3g02291 245 Gene3D - 1 244 IPR036815 -
Lapu3g02291 245 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Lapu3g02291 245 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Lapu3g02291 245 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Lapu3g02291 245 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Lapu3g02291 245 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Lapu3g02291 245 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Lapu3g02291 245 SMART 1433_4 7 245 IPR023410 -
Lapu3g02291 245 PIRSF 14-3-3 1 245 IPR000308 -
Lapu3g02291 245 FunFam 14-3-3 protein epsilon 1 245 - -
Lapu3g02291 245 Pfam 14-3-3 protein 14 235 IPR023410 -
Lapu3g02291 245 Coils Coil 195 215 - -
Lapu3g02291 245 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Lapu3g02291 245 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Lapu3g02291 245 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02291 Lapu-Chr3 44108877 44111868 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02291 3 44108877 44111868 Lapu3g02291 3 44108877 44111868 ECH
Lapu3g02291 3 44108877 44111868 Lapu2g01304 2 23833345 23837204 PCT