Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01016 ATGAAGAACTTCTCTCTCCCACACTCCGATTTGAACTCTAAATGTGCCTTCACTCTCTCTCTTCGTTTGATGGCTTTCTTCGTCGCTTCTTTCGTCCTCTGCTCTGTTATTTTCTCACTCTCCGTTGTTCTTCGAGACCCTCCCTCAGATGCTGCCCTTCGCGAACCCTCATCACTCACCCCTCTCTTTCAAGTCACTCAAGATTTGAACAATGATACCTCTGATTCTGTTGAGTTGCTTCGAGATAAACTGCACGGTGGCCTTCTAGTTGATGGATTTGATGAAAATTCTTGTCTCAGCAGGTACCAATCAGCCATGTATCATCACAGAGGGCTATCAGAAAAGCCTTCTTCTTACCTCATTTCTAGGTTAAGAAAATATGAAGCTCAACACAAACAGTGTGGACCTTACACTGAATTGTATAACAAAACAGTGGAACAACTTAGGTCTGGTCAATTTACAGAGTCCTCACCTTGTAAATATGTTGTATGGATTTCATTTAGTGGGTTAGGGAACAGGATATTGACCCTAGCTTCTGCATTTCTGTATGCTCTTCTCACAAACCGTGTTCTGCTGGTTGACCCTGGAGTGGATATGACTGATCTTTTTTGTGAACCATTTCCAGATGCTTCCTGGTTTCTCCCTCCTGATTTTCCTCTTACTGCTCAATTTAATAATTTCAGTCAGAAATCTGATCAATGTCATGGGAAAATGCTGAAAAATAAATCGGTCGTAAATTCCAATGTTCCTTCTTTTGTCTACCTTCACATTATCCATGATTATGATGATCATGATAAGCTTTTCTTTTGTGATGAAGAACAGCATTTTCTCCAGGAAGTGCCTTGGTTAGTGATGAAAACAGATAATTACTTTGTCCCATCTCTATTCTTGATGCCGTCATTTGAACAGGAACTGAATGATCTCTTCCCAAATAAGGAAACGGTTTTCCATTTCTTGAGTAGGTATCTGTTCCACCCAACTAACAGTGTCTGGGGACTTGTTACCAGATACTATCAAGCTTATTTAGCTAAAGTTGATGAAAGAGTAGGCATACAAATTAGAGTGTTTGACACAGAACCTGGTCCATTTGAGCATGTATTGGATCAGATCTTAGCTTGTACTTTGAAGCAGAAGGTTTTGCCTGATGTTAACCACCAGCGGGATGCTATCAATTCATCAGGAATTCCCAAGTCAAAAGCGGTATTGATGACATCCTTAAACGCTGGTTATTTTGAAAAGATGAGAGACATGTATTGGGAATATCCTACAGTGACAGGAGAAGTGGTTGGTGTTTACCAGCCGAGCCATGAAGGATATCAACAAACACAGAAGCAGATGCATAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACTGATGTGTTGGTTACAAGCTCATGGTCTACTTTTGGCTATGTGGCTCAAGGGCTTGGAGGTTTAAAACCATGGATTCTGTACAAACCTGAGAATCGAACAGCCCCAGATCCTCCCTGTCGGCGTGCCATGTCAATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGATTGTAAGGCAAAGAGAGGAACTGACACAGGTGAACTTGTTCCATATGTGAGGCACTGTGAGGATATGAGCTGGGGCCTTAAGCTTGTAGACAGTGATAGTTATCGCTAG 1659 0.4177 MKNFSLPHSDLNSKCAFTLSLRLMAFFVASFVLCSVIFSLSVVLRDPPSDAALREPSSLTPLFQVTQDLNNDTSDSVELLRDKLHGGLLVDGFDENSCLSRYQSAMYHHRGLSEKPSSYLISRLRKYEAQHKQCGPYTELYNKTVEQLRSGQFTESSPCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMTDLFCEPFPDASWFLPPDFPLTAQFNNFSQKSDQCHGKMLKNKSVVNSNVPSFVYLHIIHDYDDHDKLFFCDEEQHFLQEVPWLVMKTDNYFVPSLFLMPSFEQELNDLFPNKETVFHFLSRYLFHPTNSVWGLVTRYYQAYLAKVDERVGIQIRVFDTEPGPFEHVLDQILACTLKQKVLPDVNHQRDAINSSGIPKSKAVLMTSLNAGYFEKMRDMYWEYPTVTGEVVGVYQPSHEGYQQTQKQMHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGELVPYVRHCEDMSWGLKLVDSDSYR* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01016 552 Gene3D - 156 210 - -
Lapu3g01016 552 PANTHER FUCOSYLTRANSFERASE 2-RELATED 26 547 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lapu3g01016 552 Pfam Xyloglucan fucosyltransferase 63 519 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lapu3g01016 552 FunFam Galactoside 2-alpha-L-fucosyltransferase 157 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01016 Lapu-Chr3 10880966 10882980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01016 20 546 Xyloglucan Fucosyltransferase1 AT2G03220 61.914 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01016 K13681 - gmx:100803305 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01016 3 10880966 10882980 Lapu3g01016 3 10880966 10882980 ECH