Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01305 ATGATGGCTTCGCAAATGGCGATCCTCTTCCGCACGCGCTCCCTCCTCTTCCCGAAACCATCTTCCCTCATCAAAACCATATCAACATTCCCCTTCCTCTCGCAGGAGCCTCAGCTGGCGGATCCCACTCCTCTCCCTCCTAACCCCGCCTCCGGCAGCCCTCTCTACCACCAAAACTGGCGCTCCCCTATCCCCGCCTCCCATCCCTCCTCCCACGCGCTCGCTCCCGTCGGATCCTACAACCGCGCCTCCTCCGACTCCTCTGACCCTCATGCGCTCCTCGACCTCTTCGGCAATTGCATGGCCTCGCACCAGTGGACCGACGTCAAGAACCTCTTCGAGAACTGGGTCCGCTCCCTCGACAAAACCGGCAAGCCCAATCGCCCCGACGTAAACCTCTTCAACCACTATCTCCGCGCCAACCTCATGCTCGGCGCCTCCGCCTCCGATCTTATCGACCTCGTTGCGCAGATGGACGAGTTCAATGTGAAGCCCAATACGGCATCGTTTAACCTCGTCCTCAAAGCCATGTGCCAGGCCAACGAAACCGTCGCCGCGGAAAAATTGCTCCAACGGATGCTGGAGACAGGAAATGACTCTCTACCTGATGACGAATCATATGACTTAGTCATTGGAATGCTCTTTTCTACAGACCAGATTGATAACGCATTCAAATATATAGAACGAATTTTGAAATCTGGTAACGTCTTGTCAATGAAGGTATTTATGAGCTGTGTGTGGATATGTGTCAGCAAGGGCAGGCTTGATACATTGGTGACAATAATTGAAGGGTGCAGGGCATCAGATCAAAACAAAGCTCTTTGTCCCAATTGGGACTTGTGCAATTTTATTGTTGAAACTGCAACTCGAGAGGATAATAGCAAACTAACTTTTTATGGCCTGGAGTATATGGCCAGATGGATTGTAAAGGGTGAACGTCAGAGGCCCCCTATATTTCTGTGTGTAGATGAAGGTTTAGTTCTGTCAGCTCTTTTGACTGCTGGTAGAACCTATAATTCCGAGTTGCTAGGGGCATCATGGGCTGTTTTGGACCGCTCACTGCGTAAAAAGAAGGCCCCTAATCCAGAGTCATATCTAGGGAAGATATATGCCCTTGCATCATTGGGAAATCTACAAAAGGCTTTTAGTACTCTGAATGAGTATGAGCTGGCTTATGGAGACTCTGGTGAAGAAGCTGAAGAATTGTTCTGCCCATTTACTTCGTTACACCCATTGGTTGTGGCGTGCTCCAAGAAGGGTTTTGAGACTCTAGATAATGTTTATTTTCAACTGGAGAATTTAAACCGTGCAGAGCGTCCTTATAAATCTGTTGCTGCACTAAACTGCGTCATTTTAGGGTGTGCAAACATATGGGACCTTGATCGAGCTTATCAAACTTTTGAGTCAATTGGATCTACTTTTGGGTTGAGCCCTGATATTCATTCGTACAATGGGCTGATGTATGCCTTTGGGAGGCTCAAGAAGACACATGAAACGTCAAAAGTGTTTGAGCACCTGGTGAGTGTGGGTCTCAAGCCTAATGCAAAATCATATTCTCTGCTTATTGATGCCCACCTGATTAACCGGGATGTCAGATCTGCTCTTGCAGTGATTGATGATATGATAAGTGCTGGGTTTGAACCGTCAAAAGAGATTCTGAAAAGGGTCAGGCGGCGATGCATGAGAGAAATGGACTACGAAAGTGATGACCGAGTACAATCACTGGCCAATTCCTTAAATTACAGATTGGGTTCTGAAGGCCGGCGGGACATTCTGTTTAATCTTGACTACAGTGCGGGTTATGCTTGA 1809 0.482 MMASQMAILFRTRSLLFPKPSSLIKTISTFPFLSQEPQLADPTPLPPNPASGSPLYHQNWRSPIPASHPSSHALAPVGSYNRASSDSSDPHALLDLFGNCMASHQWTDVKNLFENWVRSLDKTGKPNRPDVNLFNHYLRANLMLGASASDLIDLVAQMDEFNVKPNTASFNLVLKAMCQANETVAAEKLLQRMLETGNDSLPDDESYDLVIGMLFSTDQIDNAFKYIERILKSGNVLSMKVFMSCVWICVSKGRLDTLVTIIEGCRASDQNKALCPNWDLCNFIVETATREDNSKLTFYGLEYMARWIVKGERQRPPIFLCVDEGLVLSALLTAGRTYNSELLGASWAVLDRSLRKKKAPNPESYLGKIYALASLGNLQKAFSTLNEYELAYGDSGEEAEELFCPFTSLHPLVVACSKKGFETLDNVYFQLENLNRAERPYKSVAALNCVILGCANIWDLDRAYQTFESIGSTFGLSPDIHSYNGLMYAFGRLKKTHETSKVFEHLVSVGLKPNAKSYSLLIDAHLINRDVRSALAVIDDMISAGFEPSKEILKRVRRRCMREMDYESDDRVQSLANSLNYRLGSEGRRDILFNLDYSAGYA* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01305 602 Pfam PPR repeat family 478 524 IPR002885 -
Lapu2g01305 602 PANTHER OS07G0599000 PROTEIN 2 601 IPR044605 -
Lapu2g01305 602 MobiDBLite consensus disorder prediction 38 62 - -
Lapu2g01305 602 Pfam Pentatricopeptide repeat domain 128 177 IPR002885 -
Lapu2g01305 602 Gene3D Tetratricopeptide repeat domain 92 307 IPR011990 GO:0005515
Lapu2g01305 602 Gene3D Tetratricopeptide repeat domain 325 587 IPR011990 GO:0005515
Lapu2g01305 602 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 479 513 IPR002885 -
Lapu2g01305 602 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 166 200 IPR002885 -
Lapu2g01305 602 NCBIfam pentatricopeptide repeat 517 549 IPR002885 -
Lapu2g01305 602 NCBIfam pentatricopeptide repeat 481 515 IPR002885 -
Lapu2g01305 602 NCBIfam pentatricopeptide repeat 169 197 IPR002885 -
Lapu2g01305 602 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 514 548 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01305 2 23841805 23848258 Lapu2g01305 2 23841805 23848258 ECH