Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01226 ATGAGTAGCAATGACGAAACTTCTTGTGGTAGTCTCCACATTAGGAATTTAATTTGCAACGCTGCTGCTGGTGCCACTGCTGGGGCAATAGCGGCTACATTTGTGTGCCCATTGGATGTGATCAAGACTAGGCTACAAGTCCATGGGCTTCCTCATGGGCAGAAAGGTAATGTCATTGTCACAAGCTTGCAAAATATAGTAAGGACTGAAGGCTTCAGGGGAATGTACCGTGGCCTTTCACCAACGATACTGGCATTACTCCCAAACTGGGCAGTTTACTTCACAAGTTATGAGTATGTGAAGGGCCAGCTTCGTTCACGCGATGCTTGCAGCGAACTCACAACTATTGGAAATATTATAGCAGCTGCTGCAGCTGGGGCAGCAACAGCAATTTCTACAAATCCATTATGGGTTGTTAAGACAAGACTTCAAACACAAGGAATGAGGCCTGATGTTGTTCCTTACAAGAGTGTTCTTTCTGCTCTGACAAGGATTACGCAAGAGGAAGGCATACGAGGCCTATATAGTGGCATTATTCCTTCGTTGGCTGGTATAAGTCATGTTGCAATTCAATTTCCAGCATATGAAAAGATCAAGTCATACATGGCAGAAAAAGATAACACAACTGTTGATAAGCTAACTCCTGGGAGTGTTGCCATTGCATCATCAATCTCGAAAATATTTGCCTCTGTAATGACTTATCCACATGAGGTAATAAGATCCCGGCTGCAAGAGCAAGGGCAGGCCAAAAAGAATGGGATCCAATATGCAGGGGTTATTGATTGTACTAAGAAGGTGTTTCAAAAAGAAGGCATTCCAGGCTTTTATCGTGGTTGTGCAACCAATCTTTTGAGAACAACTCCATCTGCTGTTATTACATTCACTAGTTATGAGATGATACAAAGGTTTTTGAAGCGAGTTGTAGGCCAGGATAAGGGGTATCCACAAGGATGTTCTAAATCCAATGAACTGAACAGGCCCCAACCAAAAGCCAGTGGCACTGATAAGGGGCAACCACCGTCTCAGTCTAACATGAAAGCTTCCTCAATTCCTATAGGAAACAAAGAGCAGCTAACAAGACATTGA 1086 0.4346 MSSNDETSCGSLHIRNLICNAAAGATAGAIAATFVCPLDVIKTRLQVHGLPHGQKGNVIVTSLQNIVRTEGFRGMYRGLSPTILALLPNWAVYFTSYEYVKGQLRSRDACSELTTIGNIIAAAAAGAATAISTNPLWVVKTRLQTQGMRPDVVPYKSVLSALTRITQEEGIRGLYSGIIPSLAGISHVAIQFPAYEKIKSYMAEKDNTTVDKLTPGSVAIASSISKIFASVMTYPHEVIRSRLQEQGQAKKNGIQYAGVIDCTKKVFQKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIQRFLKRVVGQDKGYPQGCSKSNELNRPQPKASGTDKGQPPSQSNMKASSIPIGNKEQLTRH* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01226 361 Pfam Mitochondrial carrier protein 214 305 IPR018108 -
Lapu2g01226 361 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Lapu2g01226 361 Pfam Mitochondrial carrier protein 19 104 IPR018108 -
Lapu2g01226 361 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 17 308 IPR044712 GO:0006862|GO:0055085
Lapu2g01226 361 MobiDBLite consensus disorder prediction 315 361 - -
Lapu2g01226 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Lapu2g01226 361 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
Lapu2g01226 361 SUPERFAMILY Mitochondrial carrier 16 299 IPR023395 -
Lapu2g01226 361 Gene3D Mitochondrial carrier domain 3 110 IPR023395 -
Lapu2g01226 361 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Lapu2g01226 361 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Lapu2g01226 361 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Lapu2g01226 361 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Lapu2g01226 361 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Lapu2g01226 361 Gene3D Mitochondrial carrier domain 111 312 IPR023395 -
Lapu2g01226 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Lapu2g01226 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01226 Lapu-Chr2 22283223 22288966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01226 33 355 Chloroplast and Mitochondria Gene Families AT1G25380 61.947 1.65e-142 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01226 2 22283223 22288966 Lapu2g01226 2 22283223 22288966 ECH