Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01185 ATGGCGTCTGAGAGCGCTTCTCGATCGAGTTCCGCTGCCGATTCCTACATTGGGAGCTTGATAAGCTTGACCTCTAAGAGTGAGATCAGATACGAAGGCATTCTGTACAACATCAACACTGAAGAGTCCAGTATTGGCCTTAGAAATGCATCGCATATATGCTGGGTCTTAGGATTACAGCAAACAAAGGGTTGGGGTTTGGGGAATTTGGCTAGTGGCCTAAATATTTTCATGCAACCCTTTGGATGTTTGCAAGTGATAATTCTGTTTTTTGGTGTTGCAGTGCGATCTTTTGGAACCGAAGGAAGGAAAAAGGATGGCCAACAAATTCCTCCTGGTGACAAGGTTTATGAGTATATACTCTTCCGTGGGACTGACATCAAGGATTTACAGGTTAAATCTTCTCCACCAGTCCAGTCTACCCCACAAGTCAACAATGACCCAGCTATTATTCAGTCTCACTATCCTCGCCCTGTCACCACATCTACAAGTTTGCCTTCTGCTGTAAGTGGGTCTTTGACTGATCTTGGCTCTCATACCCCTCAGCTTGGACTTCCTGGGTCAAATTTTCAGGGGCCCTTGCCTTTGTATCAACCTGGAGGGAACTTAGGATCATGGGGAGCTTCTCCACCTGCTCCAAATACAAATGGTGGTAGACTTGCTATGCCAATGTATTGGCAAGGGTATTATGGTGCCCCAAATGGGATTCCTCATTTACACCAACAATCTCTGCTTCAACCACCACCTGGTTTATCTATGCCTTCATCTATGCAGCAGCCAATGCAGTATCCCAATTTCAGTCCTTTACCTACTGTCTCTTCTAATTTGCCCGAATTGCCGTCATCTTTGCTACCTGTGAGTACTAGTAACCCTAGTGTAACATCTGCTTCATTGCCTTCAGCATCATCTGCATTGCCTCCTGCACCTTCTTCTTTGCCTCCTGCACCTTCTGCTTTGCCTCCTGCACCTTCTTCTTTGCCTCCTGCACCTTCTTCTTTGCCTCCTGCCTTATCTCCTGTACCCTCTGTAACACTTGCTTCTGAAATTTTACCAGTATCAGTAACAAACAAGGCACCCAATGTTTCAACTTCAGCAGTCAGTTTAGCTGCTAACTTACCATCACTGACTTCCCTGACCAATGCTGGTCCTGATATAAATGCTTTAGTGCCACCAATCACCAGTAAACCGAATGCAATTTCAGGTTCAAGTTTGCCCTATCAAACTGTATCCCAGTTGTCTCCTGCTGGTGTTGGATCATCAACTTCTATCCATGCAGAAACAGCAGCCCCTTCTCTGATAACCCCAGGTCAATTGTTGCAACATGGATCAACTATAGTTTCTCCAGCTCAGCCTTCACAAACATCTCATAAGGATGTTGAAGTGGTTCAGGTATCATCAACATCATCTCCTGAACCATCTCTGCCAGTTTCGGGTGCAATTCAACCACCAATTCTGCCATTGCCAGTAACCTCACGGCCTAGCCACAGGCCCGGTGGTGTTCCTACCCAGACTCATCATGGCTATAGTTACAGAGGACGAGGAAGAGGAAGAGCAACTGGGGGTTTGCGCCCAGTCACAAAATTCACTGAAGATTTTGATTTCATGGCAATGAATGAGAAGTTCAAAAAGGATGAAGTTTGGGGTCATCTTGGTAAAAATAAGTCTCATTCAAAAGACAAGGATGGGGAAGGAAATGCCTTTGATGAAGATTATCAAGATGAAGACGATGAAGATTTATCAAACTTTGAGGTTAAGCCTATTTATAACAAGGACGACTTCTTTGATTCACTGTCTTCCAATGTGCATGATAATACTCCACAGAATGGAAGAACTAGATACTCTGAACAAATCAAGATTGATACTGAGACATTTGGTGATTTTGTGAGGCACCGTGGTGGCCGTGGGGGTCGTGGCCCTGGCCGTGGTGGACGTTCCCGGGGCGGTTATTATGGAAGAGGAGGAGGATATGGCTATTCTGGAAGAGGTAGGGGCCGAGGCATGCCCAGTCGCAACTTGTAG 2019 0.4572 MASESASRSSSAADSYIGSLISLTSKSEIRYEGILYNINTEESSIGLRNASHICWVLGLQQTKGWGLGNLASGLNIFMQPFGCLQVIILFFGVAVRSFGTEGRKKDGQQIPPGDKVYEYILFRGTDIKDLQVKSSPPVQSTPQVNNDPAIIQSHYPRPVTTSTSLPSAVSGSLTDLGSHTPQLGLPGSNFQGPLPLYQPGGNLGSWGASPPAPNTNGGRLAMPMYWQGYYGAPNGIPHLHQQSLLQPPPGLSMPSSMQQPMQYPNFSPLPTVSSNLPELPSSLLPVSTSNPSVTSASLPSASSALPPAPSSLPPAPSALPPAPSSLPPAPSSLPPALSPVPSVTLASEILPVSVTNKAPNVSTSAVSLAANLPSLTSLTNAGPDINALVPPITSKPNAISGSSLPYQTVSQLSPAGVGSSTSIHAETAAPSLITPGQLLQHGSTIVSPAQPSQTSHKDVEVVQVSSTSSPEPSLPVSGAIQPPILPLPVTSRPSHRPGGVPTQTHHGYSYRGRGRGRATGGLRPVTKFTEDFDFMAMNEKFKKDEVWGHLGKNKSHSKDKDGEGNAFDEDYQDEDDEDLSNFEVKPIYNKDDFFDSLSSNVHDNTPQNGRTRYSEQIKIDTETFGDFVRHRGGRGGRGPGRGGRSRGGYYGRGGGYGYSGRGRGRGMPSRNL* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01185 672 MobiDBLite consensus disorder prediction 627 672 - -
Lapu2g01185 672 SUPERFAMILY Sm-like ribonucleoproteins 15 50 IPR010920 -
Lapu2g01185 672 SMART FDF_2 526 628 IPR019050 -
Lapu2g01185 672 PANTHER SCD6 PROTEIN-RELATED 11 49 - -
Lapu2g01185 672 MobiDBLite consensus disorder prediction 286 305 - -
Lapu2g01185 672 MobiDBLite consensus disorder prediction 550 565 - -
Lapu2g01185 672 MobiDBLite consensus disorder prediction 445 475 - -
Lapu2g01185 672 ProSiteProfiles DFDF domain profile. 520 556 IPR025762 -
Lapu2g01185 672 Pfam FDF domain 527 625 IPR019050 -
Lapu2g01185 672 MobiDBLite consensus disorder prediction 476 490 - -
Lapu2g01185 672 CDD LSm14_N 16 132 IPR025609 -
Lapu2g01185 672 ProSiteProfiles FFD box profile. 586 601 IPR025761 -
Lapu2g01185 672 MobiDBLite consensus disorder prediction 245 274 - -
Lapu2g01185 672 MobiDBLite consensus disorder prediction 286 338 - -
Lapu2g01185 672 SMART LSM14_2 10 155 IPR025609 -
Lapu2g01185 672 ProSiteProfiles TFG box profile. 608 628 IPR025768 -
Lapu2g01185 672 MobiDBLite consensus disorder prediction 445 522 - -
Lapu2g01185 672 MobiDBLite consensus disorder prediction 550 577 - -
Lapu2g01185 672 SUPERFAMILY Sm-like ribonucleoproteins 95 137 IPR010920 -
Lapu2g01185 672 MobiDBLite consensus disorder prediction 306 337 - -
Lapu2g01185 672 Pfam Scd6-like Sm domain 16 134 IPR025609 -
Lapu2g01185 672 Gene3D - 6 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01185 Lapu-Chr2 20920566 20928569 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01185 2 20920566 20928569 Lapu2g01185 2 20920566 20928569 ECH