Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01273 ATGACACAAGTTCAAGACAGAGACAACACTCGCAACAACCATCATTACATTTCTTCAACACCCGCAGCAACAACACAATCTCCAATGACCAATTTGCCGCGAGATCTGTTGAGAAGCTTCATGGGAGTGAACAATCATCATAGCCACCATGGTAATCATCAGAATTTATCTGTGCCGGTGGTGAAGTTAGAGGAGGAAGAAGAGGAATTAGAGCTAAGTCTCGGCCTTTCGATGAATGGTCGATTTGGGGTGGACCCCACTGCAAAGAAGATAAAGAGAACGACCTCGATTCCTGAGTTCGTGAGGGACGATGAGACGGGATACGCTGTCCTGGGCTGCACGGGTCCTCTGGTGAGGACATGCTCCCTGCCAACGGAAACTGAAGAGGAGTGGCGGAAGAGGAAGGAGTTGCAGACCCTGCGCCGCATGGAGGCCAGGAGGAAGCGCTCAGAGAAGCAGAGGAATTTGAAGGCTCTCAGAGAACAACAACAACAACAACAAAGGGTTGGGTCTGAAGGGAATAATCCTATGGAACAAGGTGTGGGGACTCACCCTGAGGGTGCACCCTTGGGAAGAACCGTGTCTTTGACCACAAGTGTTTGTGGACTAGGTTTGAATGCGGATACTGAGAAAGAGAAGAAGAAGGGTGGAGTAGTGTTGGTGCCTCCATCGCCTTCTCAGGGTTCCATTGGTTCTTCGGGAACCTCAGAAGTTGAGTCTCAACCAGGTCAAGGACCAACACCAATGGATGTTAGAAGCCCTACTAGTGCCAACTTGTTGCCAGACAGTGAGCTGAAATCAACAATTGCTGCTCAAGGAAGTGTTGCTGAGAAAGCAGGCAAGAATGCTGCTGCTGTGGCTATGAGAAGTCAATCAAACAAACATTCGCTTCCCCAGAACAGAACCAAAGACATTGTGAGGAACTTGTTGGAAGACATGCCCTGTGTGTCCACAAAAGGTGATGGTCCTAATGGAAGAAGAGTGGAAGGTTTTCTTTATCGGTATGGGAAAGGTGAGGAAGTGAGGATAGTGTGTGTTTGCCATGGCAGTTTTCTCACCCCTTCAGAATTTGTTAAGCATGCTGGTGGCGGTGACGTGGCAAACCCATTGAAGCATATTGTTGTTAGTCCAAGCATTTTGTGA 1143 0.4864 MTQVQDRDNTRNNHHYISSTPAATTQSPMTNLPRDLLRSFMGVNNHHSHHGNHQNLSVPVVKLEEEEEELELSLGLSMNGRFGVDPTAKKIKRTTSIPEFVRDDETGYAVLGCTGPLVRTCSLPTETEEEWRKRKELQTLRRMEARRKRSEKQRNLKALREQQQQQQRVGSEGNNPMEQGVGTHPEGAPLGRTVSLTTSVCGLGLNADTEKEKKKGGVVLVPPSPSQGSIGSSGTSEVESQPGQGPTPMDVRSPTSANLLPDSELKSTIAAQGSVAEKAGKNAAAVAMRSQSNKHSLPQNRTKDIVRNLLEDMPCVSTKGDGPNGRRVEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKHAGGGDVANPLKHIVVSPSIL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01273 380 PANTHER AFP HOMOLOG 2 33 378 IPR031307 GO:0007165
Lapu1g01273 380 Pfam Ethylene-responsive binding factor-associated repression 65 99 IPR012463 -
Lapu1g01273 380 MobiDBLite consensus disorder prediction 225 259 - -
Lapu1g01273 380 Pfam Tify domain binding domain 341 375 IPR032308 -
Lapu1g01273 380 Coils Coil 133 169 - -
Lapu1g01273 380 MobiDBLite consensus disorder prediction 143 192 - -
Lapu1g01273 380 MobiDBLite consensus disorder prediction 159 178 - -
Lapu1g01273 380 MobiDBLite consensus disorder prediction 14 30 - -
Lapu1g01273 380 MobiDBLite consensus disorder prediction 1 30 - -
Lapu1g01273 380 MobiDBLite consensus disorder prediction 143 158 - -
Lapu1g01273 380 Pfam Putative nuclear localisation signal 117 168 IPR032310 -
Lapu1g01273 380 MobiDBLite consensus disorder prediction 207 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01273 Lapu-Chr1 25532727 25536324 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01273 1 25532727 25536324 Lapu1g01273 1 25532727 25536324 ECH