Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00163 ATGGCTCAACAAATTCAAGATATCAGCAACAGACTAGAAAAGGTTGCAGCTGATAGGCATAAGTTTGGTCTTCAAACAATTGACGTTGACACACGCGTGGTTCATCGGAGAGAATTGACACACTCCCGTGTGAGTGATTCAGATGTGATAGGAAGGGAACAGGATAAAGAAAAGATCATAGAACTTTTGATGCAGCAGAATCCTAATGCTGATGATACAAGTCTCTCTGTTATCCCCGTTGTGGGGATTGGAGGCTTGGGAAAAACTACAATTGCAAAGTTTGTGTTCAATGACAACAGGATCCAGAAGTGTTTCCCACTGAAGATGTGGGTGTGTGTTTCTGATGATTTTGACATTAAACAACTGATTATCAAAATTATCAATTCTGTCAATGATCAAGCTTCTGCTGATGCTCCTTCTCACCAAAAGAATTGGAACATGTTGGATCCGGAGCAACTGCAAAATGAACTGAAAAACAAACTTTCCGGTCAAAAATTCTTACTTGTCTTGGACGATGTATGGAACGAAGACCGTGTTAAATGGGTTGAACTGCGGAATTTAATCCAAGTAAGTGCTGCAGGAAGTAAAATTGTAGTGACCACACGTAGTCATTCAATTGCTTCCATGATGGGCACAGTTCCCTCCCACATTCTAGAAGGTCTTTCTGAGGAGGATTCATTGTCTCTCTTTGTCAAATGGGCATTTAAAGAAAGAGAAGAGGAAAAACACCCTCACTTAATAAATATTGGGAGAGAAATTGTGAAAAAGTGCAGTGGAGTTCCTTTGGCAGTGAGAACATTAGGGAGCTTACTATTCTCGAAATTTGAGGCCAGTGAATGGGAATATGTGAGAGACAATGAAATTTGGAATTTGTCTCAGAAAAGGGATGACATTTTACCTGCCCTTAAATTAAGTTATGATCTAATGCCGTCCTATTTGAGGCAATGTTTTGCCTTGTTTTCCCTTTATCCAAAGGATTATGTACACAGTAATTTTGAGATAGCTTCGCTTTGGGCCGCACTTGGACTCATCACATTACCAAAAAAGAATAGGACCCTTCAAGATGTGGCCAATCAATATTTGCATGAACTTCAGTCAAGATCTTTCATTCATGCTTTTGAAAGCATACACACTTCTTATTGTTTTGGAATACATGATTTGGTGCATGATCTCGCTCTATTTGTTGCAAAGGATGAGTGTCTATACGTAAGTTCCAACATTCAAAATATTCCAGATAATGTTCGGCATCTGTCTTTTGCTGAAAGCAGTTTGTTTGACAATTTAGTCATAAAAAAATCAGCAGCTGTGAGAACTGTACTGTTTCCAAATGGTGCAGCAGCTGCCAACGGTGAAGCTTTACTAGATACGTGTCTGTCAAAGTTCAAATGCTTGCGAGTTTTGGATTTACATAATTCGACATTCGACACTTTGCCCCTTACCATTTCTAAGTTGAAACATTTGAGATATTTGGACATTAGCGGAAATCGCAGCATTAAGAGACTCCCCGCGTCTATTTGCAAGCTCCAAAGTTTGCAAGTGTTGAAGCTTGACGGATGCTCGGAGCTGGAAGCATTGCCCAAAGGATTAAGAAAATTGATCAGTATCCGTGATTTGAAGTTTAGTGTAAGGCAAAGTGTTTTGCCTGTCAATGTGATCGCCAACTTGGACTCGCTTGAAATCTTGACTCTTGAATCATGCTATTATGTGGAGTCCATCTTTGAAGGGGTGAAATTCCCCGCTCTTAAAGTATTAAGAGAATCAGGAGAATTAGAGGAAGAGCAAGACTTGGAGGAATGCATTAAGGAAGGACACAGATAG 1818 0.3988 MAQQIQDISNRLEKVAADRHKFGLQTIDVDTRVVHRRELTHSRVSDSDVIGREQDKEKIIELLMQQNPNADDTSLSVIPVVGIGGLGKTTIAKFVFNDNRIQKCFPLKMWVCVSDDFDIKQLIIKIINSVNDQASADAPSHQKNWNMLDPEQLQNELKNKLSGQKFLLVLDDVWNEDRVKWVELRNLIQVSAAGSKIVVTTRSHSIASMMGTVPSHILEGLSEEDSLSLFVKWAFKEREEEKHPHLINIGREIVKKCSGVPLAVRTLGSLLFSKFEASEWEYVRDNEIWNLSQKRDDILPALKLSYDLMPSYLRQCFALFSLYPKDYVHSNFEIASLWAALGLITLPKKNRTLQDVANQYLHELQSRSFIHAFESIHTSYCFGIHDLVHDLALFVAKDECLYVSSNIQNIPDNVRHLSFAESSLFDNLVIKKSAAVRTVLFPNGAAAANGEALLDTCLSKFKCLRVLDLHNSTFDTLPLTISKLKHLRYLDISGNRSIKRLPASICKLQSLQVLKLDGCSELEALPKGLRKLISIRDLKFSVRQSVLPVNVIANLDSLEILTLESCYYVESIFEGVKFPALKVLRESGELEEEQDLEECIKEGHR* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00163 605 FunFam Probable disease resistance protein At1g61300 31 214 - -
Lapu1g00163 605 Pfam NB-ARC domain 52 307 IPR002182 GO:0043531
Lapu1g00163 605 Gene3D - 220 304 IPR042197 -
Lapu1g00163 605 Pfam Leucine rich repeat 464 519 IPR001611 GO:0005515
Lapu1g00163 605 SUPERFAMILY L domain-like 384 585 - -
Lapu1g00163 605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 319 IPR027417 -
Lapu1g00163 605 Gene3D - 305 393 IPR036388 -
Lapu1g00163 605 Gene3D Ribonuclease Inhibitor 430 601 IPR032675 -
Lapu1g00163 605 PANTHER DISEASE RESISTANCE PROTEIN RP 3 591 IPR044974 GO:0006952
Lapu1g00163 605 Gene3D - 31 215 IPR027417 -
Lapu1g00163 605 PRINTS Disease resistance protein signature 77 92 - -
Lapu1g00163 605 PRINTS Disease resistance protein signature 257 271 - -
Lapu1g00163 605 PRINTS Disease resistance protein signature 506 522 - -
Lapu1g00163 605 PRINTS Disease resistance protein signature 160 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00163 Lapu-Chr1 7243564 7245902 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00163 1 7243564 7245902 Lapu1g00163 1 7243564 7245902 ECH