Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00790 ATGTCTACGATGCAAGAACAAGGCCTAGAAATAGTGGTGAAGGGATCAAAGTGTGAAGAGTGTGGGAACCAAGCCAAAAAGGATTGTGCATACTCGAGGTGCAGAACCTGCTGCAAGAACAAAGGGTTCAAGTGCCAAACCCATATTAGAAGCACTTGGATTCCTGTGGATAGAAGACGCCAGAAAGTGGAGCAGCAACCTCTCACCACTAATCTTCAGGGAGATATTCCCAAAAGGCACAAGCACAACCCATATTCAAGCATGGAGTTCAAATTTCCAGCTGTTACGAGTTCCATGGCGTTATTCAGCTGTGTTCAGGTGCGTTCTATGGATGACACGGTTAATGAAATCGCGTATCAAACTTCTGTGAACATTGGAGGACATGTGTTTAGTGGTTTTCTTTATGATCAAGGTCCCGAACAAAGCTTCAATACTAAGGGTGACAACAGCTCCATAGACCCTTTTGAACAACAACACAATCTCAATCTTAGGAGTGTTTCTTTCCACAGTCGTCATGGTGCAAGTGCAACCATGCCTCCACTCGCAGCCACTGCTTCTCAGGAACCATTTTTTATTCCACACCATCCATTTCCCCTAGCTTCCTTCAGACCTGATCTGACATACTTGTCACACCCAAAATCTTAA 645 0.4465 MSTMQEQGLEIVVKGSKCEECGNQAKKDCAYSRCRTCCKNKGFKCQTHIRSTWIPVDRRRQKVEQQPLTTNLQGDIPKRHKHNPYSSMEFKFPAVTSSMALFSCVQVRSMDDTVNEIAYQTSVNIGGHVFSGFLYDQGPEQSFNTKGDNSSIDPFEQQHNLNLRSVSFHSRHGASATMPPLAATASQEPFFIPHHPFPLASFRPDLTYLSHPKS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00790 214 NCBIfam putative zinc finger domain, LRP1 type 17 59 IPR006510 -
Lapu11g00790 214 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 14 193 IPR007818 GO:0003700|GO:0006355
Lapu11g00790 214 Pfam Domain of unknown function (DUF702) 15 140 - -
Lapu11g00790 214 NCBIfam LRP1 C-terminal domain 91 139 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00790 Lapu-Chr11 10731138 10732085 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lapu11g00790 DUF702 1.7e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00790 11 10731138 10732085 Lapu11g00790 11 10731138 10732085 ECH
Lapu9g02265 9 37223154 37224908 Lapu11g00790 11 10731138 10732085 ECH