Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01170 ATGTCGTCCGGCGGCCCCACCACGACTTCCTCGAACACCAGCCCAAGGGTCGCCGCGGGGCCCACCACCACGCGCCGTCGCGTGGCAGACAACATCAACAACAACGCGGTCGACGCGGAGAAGCAGCTGCAGCACCAGCAGGTATCCTCGAGTTTCTCCGATTTCTCCGAGGTGGAGGCGGATGAGACCTCCACCCACGCCCATGCCCATGCCCATCCCCACGCTCATCACCACCACCTGCACCCGGTGACGCGCTATCTGCTTCTCCGAGCGCGTATCCTGCTGTGTGTGCCAGAATCTCTGTTCCACCGCGTGGAACAGCTAGCGCTCTGGGTGGCGGGGTCGGTGCAGGGTCTCCGGTCGGGGAAACACGTTGGGAGGAAGATCTTTGCGGCGCTGATCGGCTTGTTGGTGATGTCTGTGTTCCTGAAAGTGTCGCTGCTCGGAACGGGCATGGAAATGAACGGGAAGAGATTCAAGGGCATCGAGAACGGCCAACTCATTCTGCAGCGCTTCAAGGAGGATTGGGCTTACGCGCAACGGGTCATCACCGAAACCCGAACTGAACCCTCCATGCCCAAACGGGTCCTCGAGAGACTTCCGACTCCAGAAATATGGATGAAGCCAAACAGTGACAAGTATTACCAATGCGTTTCTCGACCCAGGAATGTAATAAGGCCCGTGAAGACAAATGGATATCTTCTTGTTCATGCCAACGGTGGATTGAATCAAATGAGAACTGGGATATGTGATATGGTTGCAGTGGCAAAAATAATGAATGCCACCCTCGTCCTTCCCTCTCTTGACCATGATTCGTTTTGGACTGATCCGAGTGACTTTAAAGATATTTTTGACTGGAGGCACTTTATGAAGGTTCTGAAAGACGACATTAACGTAGCTGAGTACTTGCCGGTCCGGTATGCATCCTTCAAACCTCTTGTGAAGGCCCCTGTTTCCTGGTCGAAGGCTAGTTACTACAGAGGTGAGATTCTCCCATTGCTGAAGCGACATAAGGTTGTACAGTTTACTCACTCGGATTCCCGGCTAGCCAACAATGGCCTAGCTTCCTCTATTCAGAAGCTTAGGTGCCGTGCCAATTACCATGCTCTCAAGTACACAGCAGAAATTGAAGTGCTTGGAAGGGTTTTGGTGGATAGGCTAAGAAACAATAATGAACCATATATTGCCCTTCATTTAAGATATGAAAAAGACATGCTAGCATTTACTGGCTGCAGTCACAATCTCACTGCTGAGGAGGCTGAGGAACTGAGGGTTATGAGGTATGACGTGAAGCATTGGAAGGAAAAAGAGATTGATAGCGTGGATAAAAGATTGCAAGGAGGGTGCCCAATGTCACCTAGAGAGGCAGCTATTTTTCTCAAGGCAATGGGGTACCCTCCCACCACAACAATCTACATTGTTGCAGGACCTATTTATGGTGGCAGTAGCATGGAAGCCTTTCAATCCGAGTTTCCCAATGTCTTCACTCATTCTACCCTTGCAACAGATGAGGAGTTGGAACCCTTCAAGCCATACCAGAACCGTCTCGCTGCTTTGGATTATATAGTGGCCCTAGAAAGCGACGTCTTCGTATATACCTATGATGGAAACATGGCTAAGGCAGTGCAAGGTCATAGGAGGTTTGAAGGGTTTCGGAAAACCATCAATCCTGACAGATTGAATTTCGTTAGGCTGATCGATCAATTGGATGAGGGTGCCATATCTTGGGAAGCATTTGCTTCTGAGGTTAAGAATTCACATTCCAATAGGCTAGGTTCGCCCTATCGTAGACAGGTAGGAGAGTCACCTAGAACAGAGGAGAATTTTTTCGCCAATCCCTTTCCTGGTTGTGTGTGTAACAAGTCTGAGGAGCGAATTACCAGCCAGAAACTAGACCATCGGTTTGTTGTTGAGGCACAAAGATAG 1926 0.501 MSSGGPTTTSSNTSPRVAAGPTTTRRRVADNINNNAVDAEKQLQHQQVSSSFSDFSEVEADETSTHAHAHAHPHAHHHHLHPVTRYLLLRARILLCVPESLFHRVEQLALWVAGSVQGLRSGKHVGRKIFAALIGLLVMSVFLKVSLLGTGMEMNGKRFKGIENGQLILQRFKEDWAYAQRVITETRTEPSMPKRVLERLPTPEIWMKPNSDKYYQCVSRPRNVIRPVKTNGYLLVHANGGLNQMRTGICDMVAVAKIMNATLVLPSLDHDSFWTDPSDFKDIFDWRHFMKVLKDDINVAEYLPVRYASFKPLVKAPVSWSKASYYRGEILPLLKRHKVVQFTHSDSRLANNGLASSIQKLRCRANYHALKYTAEIEVLGRVLVDRLRNNNEPYIALHLRYEKDMLAFTGCSHNLTAEEAEELRVMRYDVKHWKEKEIDSVDKRLQGGCPMSPREAAIFLKAMGYPPTTTIYIVAGPIYGGSSMEAFQSEFPNVFTHSTLATDEELEPFKPYQNRLAALDYIVALESDVFVYTYDGNMAKAVQGHRRFEGFRKTINPDRLNFVRLIDQLDEGAISWEAFASEVKNSHSNRLGSPYRRQVGESPRTEENFFANPFPGCVCNKSEERITSQKLDHRFVVEAQR* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01170 641 CDD O-FucT_plant 233 554 IPR024709 -
Lapu10g01170 641 Gene3D - 379 560 - -
Lapu10g01170 641 FunFam O-fucosyltransferase 28 364 558 - -
Lapu10g01170 641 Coils Coil 29 49 - -
Lapu10g01170 641 MobiDBLite consensus disorder prediction 1 27 - -
Lapu10g01170 641 PANTHER OS02G0726500 PROTEIN-RELATED 123 621 - -
Lapu10g01170 641 Pfam GDP-fucose protein O-fucosyltransferase 233 548 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01170 Lapu-Chr10 14533784 14539189 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g01170 10 14533784 14539189 Lapu10g01170 10 14533784 14539189 ECH