Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0870 ATGAAGATCTGCTGCATTGGAGCTGGGTATGTCGGTGGCCCAACCATGGCTGTTATTGCCTTGAAATGTCCTGAGATTGAGGTAGTTGTGGTGGATATCGCTGCACCGCGAATTAACGCCTGGAACAGCGACCACCTCCCAATCTATGAGCCGGGCCTTGATGATGTAGTGAAGCAGTGCAGGGGGAAGAACCTTTTCTTCAGCACTGATGTGGAGAAACATGTTGCTGAGGCTAATATAGTCTTCGTCTCGGTGAACACCCCGACAAAAACTCAGGGTCTTGGAGCTGGAAAGGCAGCTGATCTGACTTATTGGGAGAGTGCTGCTAGGATGATTGCTGATGTTTCGAAATCGGACAAAATTGTGGTTGAGAAATCGACTGTCCCTGTTAAAACAGCAGAGGCAATTGAGAGGATTCTGACTCACAATAGGAAAGGCATCAATTTTAACATTTTGTCTAACCCTGAATTTCTCGCCGAGGGTACAGCAATTGCAGATCTGTTTAACCCTGATCGAGTCCTTATCGGAGGCCGGGAGACCCCTGAAGGTCAAAAGGCTATTAAGACTCTGAAAGATGTTTATGCCCATTGGGTCTCCGATGACAGAATCCTTTGCACCAATTTGTGGTCTGCTGAACTGTCAAAGCTTGCTGCCAATGCTTTCCTAGCACAGAGGATCTCCTCTGTGAATGCTATGTCTGCACTCTGTGAAGCAACTGGTGCTGATGTCTCTCAAGTATCCCACTCAATCGGCACAGACTCGAGAATTGGACCCAAGTTCTTGAATGCCAGTGTTGGTTTTGGAGGCTCCTGCTTCCAGAAGGACATATTGAACTTGGTCTATATCTGCGAGTGCAATGGCCTTCCTGAGGTAGCTAATTACTGGAAACAGGTCATTAAGGTGAATGACTACCAGAAAAACCGGTTCGTTAACCGAGTTGTTTCTTCAATGTTCAACACAGTCTCTGGGAAGAAAATTGCTATATTGGGTTTTGCTTTCAAGAAGGACACCGGCGACACTAGGGAGACCCCAGCTATTGATGTCTGCAAGGGACTTTTGGGAGACAAAGCTAAGCTGAGCATATATGATCCTCAGGTTACCGAAGAACAAATCACGAGGGATCTATCAATGAAGAAATTTGATTGGGATCATCCTGCTCATCTTCAACCATCAAGCCCAGTGACCAACAACAAGCAAGTTTCTGTGGTTTGGGATGCCTATGAGGCAATCAAGGATGCACACGGTATCTGTATCCTGACCGAGTGGGACGAGTTCAAGAAGCTTGATTACCAAAAAGTTTACGAAAGCATGCAGAAGCCTGCATTCGTATTTGATGGCCGGAACGTCGTGGATGCTAACAAGCTGAGGGAGATTGGGTTTATTGTTTATTCCATTGGCAAGCCATTAGATTCATGGCTCAAGGACATGCCCGCTGTAGCATAA 1443 0.465 MKICCIGAGYVGGPTMAVIALKCPEIEVVVVDIAAPRINAWNSDHLPIYEPGLDDVVKQCRGKNLFFSTDVEKHVAEANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIERILTHNRKGINFNILSNPEFLAEGTAIADLFNPDRVLIGGRETPEGQKAIKTLKDVYAHWVSDDRILCTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVSQVSHSIGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKNRFVNRVVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEEQITRDLSMKKFDWDHPAHLQPSSPVTNNKQVSVVWDAYEAIKDAHGICILTEWDEFKKLDYQKVYESMQKPAFVFDGRNVVDANKLREIGFIVYSIGKPLDSWLKDMPAVA* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0870 480 Gene3D - 208 239 - -
Lan9g0870 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 185 IPR001732 GO:0016616|GO:0051287
Lan9g0870 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 327 451 IPR014027 GO:0016616|GO:0051287
Lan9g0870 480 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 201 IPR036291 -
Lan9g0870 480 PIRSF UDPglc_DH_euk 1 480 IPR028356 GO:0003979
Lan9g0870 480 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 1 2 480 - -
Lan9g0870 480 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 314 463 IPR036220 -
Lan9g0870 480 SMART UDPG_MGDP_dh_C_a_2_a 327 452 IPR014027 GO:0016616|GO:0051287
Lan9g0870 480 PIRSF UDPglc_GDPman_dh 1 467 IPR017476 GO:0016616
Lan9g0870 480 Gene3D - 1 207 - -
Lan9g0870 480 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 2 480 IPR028356 GO:0003979
Lan9g0870 480 Gene3D - 240 478 - -
Lan9g0870 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 303 IPR014026 GO:0016616|GO:0051287
Lan9g0870 480 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 1 448 IPR017476 GO:0016616
Lan9g0870 480 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 209 308 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0870 Lan-Chr9 14587841 14590341 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0808 11 7623167 7625656 Lan9g0870 9 14587841 14590341 LSH
Lan6g0882 6 8242464 8245388 Lan9g0870 9 14587841 14590341 PCT
Lan9g0870 9 14587841 14590341 Lan6g0882 6 8242464 8245388 PCT