Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0593 ATGTTTGAAGCTACAATGGAGAAGACAGGGTTGAATTCAAAGAATAAACTCACAACATTCTTTGTTGTAATTTTCATAGCATTCCCTATTGTTTTCACTGTTACCATAAAACTCAGAAACTCAAGCTTCAAAATCCTTGAAGGTTATTCTGAAAACAAGGTACTAGAAAGTGGTGAAATAGCTCAGAAAAATATCACATTTGAGTTGTTGAATGAAAAGTTAAATGTTACAAACAATGGATCAAGAAGGGTCCAAAATGTAACACATGAAAACTCAGATGGGGGAATTCAAAGGGTTACAGACCCTATTGAAGGAAGAACTACAGATAGGAAAATAGTAGCATCAGAAGAAGGGCACAAAAATGCTTCATTGACAAGTTCAACAAATGATTCAAGTTCAATTTTGATTCATAATGAGAAAGACAAGTTACTAGATGGACTTTTAGTTTCTGGATTTGATGAAGCCTCATGCATAAGCAGGGTTCAGTCTCATTCGTTCCGTAAAGCTTCTCTTCACAAACCTGCTCGATATCTGATATCGAAGTTGCGCGACTACGAAGAACTTCATGGTAAGTGTGGACCTTATAGTAGAGCTTATAAGAGAAACGTGAAGCATCTACAATCTAAGAAAAATATTGGTGCTGCAATGTGTAAATACATTGTTTGGGATCCTTCAAATGGCTTAGGGAACCAAATGATTAGCATAGTTTCATCATTTCTGTATGCTATTCTCACAGAGAGAGTGCTACTTGTAAGATTTGGTGCAGACATGAATGGCCTATTTTGCGAGCCGTTTCTTAATTCGACTTGGGAATTGCCTAAGAATACTCCATTTTGGAATGAAAGGCGCGTCGAAACATACCAGACTATGCTAAAGAAGGACAAGGCTAATAACATTTCTAAGGAGGCATTACCATCAACTTTGTTTCTAAATCTTCAACACACCATTGATGATCCCGAGAAACTTTTCCATTGTGATTATAATCAAGATCTTCTAAGGCACATCCCTTTGTTGATTTTGCAGTCAGATCAATATTTTGTCCCTTCTTTGTTCATGAACCCATCTTTCAACTTGGAGATTAACAAAATGTTCCCTGAAAAGGACACAATTTTCCACCATTTATCGCGCTACCTTTTCCACCCTTCAAATGAGGCATGGGGACTAATCAGCAGATTCTATCAAACATACTTAGCCGAAGCCGACGAGAAGATTGGCCTTCAGATAAGAGTATTTAGTCCTAATACTACCCCAAAGCAAGCAATTATGGACTTAGTTTTAAACTGCACCATAAGTAATAACCTGCTGCCGGAACTCGATACAAAAAATCCAGCGTCTTCTTATACTCGAAACAAGACTCTAAATGCTGTTCTAGTTGCATCCTTATATCCAGAGTATGGTGAGAGTTTAAGGGCTATGTACTTGAATAAACCAAGTATTAGTGGAGAACTAATTGGAGTTTATCAACCAAGTCATGAAGAGAAACAAAAGTTTCATGATAACATGCATAACATGAAGGCATGGACTGAAATCTATCTACTAAGTTTATCTGATGTTTTGGTCACTACTTCTCTATCAACTTTTGGTTATGTAGCACAAGGTTTAGGTGGTTTGAAACCTTGGCTTCTTTACAAGTTGATTAGTAATGATACTCATTTTCCAGCATGTGAAAGGGACTTTTCATTTGAGCCTTGTAATCATATTCCTCCAAAGCATTACTGCAATGGCAAGACTATAAAGGATTATGCTTCTTCTTTCCCTTTTTTGAAGGGATGCATTGATTATTCTATTGGAGTGAAGCTGGTTAATGATTCTGCTACATGA 1821 0.369 MFEATMEKTGLNSKNKLTTFFVVIFIAFPIVFTVTIKLRNSSFKILEGYSENKVLESGEIAQKNITFELLNEKLNVTNNGSRRVQNVTHENSDGGIQRVTDPIEGRTTDRKIVASEEGHKNASLTSSTNDSSSILIHNEKDKLLDGLLVSGFDEASCISRVQSHSFRKASLHKPARYLISKLRDYEELHGKCGPYSRAYKRNVKHLQSKKNIGAAMCKYIVWDPSNGLGNQMISIVSSFLYAILTERVLLVRFGADMNGLFCEPFLNSTWELPKNTPFWNERRVETYQTMLKKDKANNISKEALPSTLFLNLQHTIDDPEKLFHCDYNQDLLRHIPLLILQSDQYFVPSLFMNPSFNLEINKMFPEKDTIFHHLSRYLFHPSNEAWGLISRFYQTYLAEADEKIGLQIRVFSPNTTPKQAIMDLVLNCTISNNLLPELDTKNPASSYTRNKTLNAVLVASLYPEYGESLRAMYLNKPSISGELIGVYQPSHEEKQKFHDNMHNMKAWTEIYLLSLSDVLVTTSLSTFGYVAQGLGGLKPWLLYKLISNDTHFPACERDFSFEPCNHIPPKHYCNGKTIKDYASSFPFLKGCIDYSIGVKLVNDSAT* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0593 606 PANTHER FUCOSYLTRANSFERASE 2-RELATED 13 604 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lan9g0593 606 Gene3D - 215 271 - -
Lan9g0593 606 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 13 604 - -
Lan9g0593 606 Pfam Xyloglucan fucosyltransferase 136 573 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0593 Lan-Chr9 8661277 8664187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0593 141 601 Xyloglucan Fucosyltransferase1 AT2G03220 49.679 1.60e-160 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0593 K13681 - gmx:100818288 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0495 5 10380835 10382872 Lan9g0593 9 8661277 8664187 LSH
Lan9g0593 9 8661277 8664187 Lan2g0594 2 9291518 9294220 LSH
Lan6g1829 6 29559167 29561379 Lan9g0593 9 8661277 8664187 PCT
Lan9g0593 9 8661277 8664187 Lan6g1829 6 29559167 29561379 PCT