Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0046 ATGGTCTTTCCTTCCCTTCCAATCTATCTAGATCCACCCAATTGGTCACAACAACAACCTAATCAGCAAGGAGGAATTGGAACACAGATTTTTCAAACCCTACCTCCACTACATCCACCTCCTCCAACGACTGCATCAGTCGTTGAAGGTGGTAACTATCAGGGCTCTATCAGACCAGGATCAATGGTCGATAGAGCTCGATTAGCAAAGATACATCAACCAGATGCCGAATCAAAGTGTCCAAGATGCGATTCCACAAACACTAAGTTCTGCTACTACAACAACTACAGCCTTTCGCAGCCTCGCCATTTCTGCAAGACTTGTCGCCGATATTGGACAAGAGGAGGTGCACTAAGAAATGTTCCAGTTGGTGGTGGCTTCAGAAGAAACAAAAGAAACAAAGGAAACAACAATAGATCAAAATCACCAATGAAAAGTGCAGTTTCTATATCTGCAAGTGCAAATTCTAATTCTTCTAGTGTCTGCACTAATAGTACTGATATGATGAGTCATTTTCCAAATCACTTCCCATTCTTACCAACTTTGCATCATAACTCATATAGTGACTACATTTCTGAGAGCACTGGTTTGCATTTTGGAACATCATTAGATGCCAGAAATGGAAATAATGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTAGTGATGCTGAGTTTCAAATTGGTACTAGTTCATGTGGTGGTAATGGTAATGGTAATAATAGTGGTGATTCTTCATTTTCAAATGGCCTTCATCTTGAGCAATGGATGTTACCCAATCTTCAACAAGTTCATCAGCAACAGTTTCCTAATTTCTTGAATAACTTGGAACTGTTTAAGTTTGATGGAGAAAAGGCTGAACCACCAAGTTATGTTAGGGATGGAGGAATGAAGTTTTTATCTAAGTCATTGGATTCTAGTGTTAGTGGGATAAACCCTCAAATTAACACAACCAGAATGGAAGAAAATCAAGGGTTGAGAAAAAATATTTTGGGTACCAATTCAGGAAATGATATATTTTGGAGTGGAAGTAACACTGCATGGACTGAAGTTCCTAGTTTCACTCCATCAACCAACCAAATGTTGTGA 1086 0.3996 MVFPSLPIYLDPPNWSQQQPNQQGGIGTQIFQTLPPLHPPPPTTASVVEGGNYQGSIRPGSMVDRARLAKIHQPDAESKCPRCDSTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRNKGNNNRSKSPMKSAVSISASANSNSSSVCTNSTDMMSHFPNHFPFLPTLHHNSYSDYISESTGLHFGTSLDARNGNNAGAGAGAGAGSDAEFQIGTSSCGGNGNGNNSGDSSFSNGLHLEQWMLPNLQQVHQQQFPNFLNNLELFKFDGEKAEPPSYVRDGGMKFLSKSLDSSVSGINPQINTTRMEENQGLRKNILGTNSGNDIFWSGSNTAWTEVPSFTPSTNQML* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0046 361 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 358 IPR045174 GO:0003700|GO:0006355
Lan9g0046 361 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 9 358 - -
Lan9g0046 361 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
Lan9g0046 361 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Lan9g0046 361 MobiDBLite consensus disorder prediction 123 147 - -
Lan9g0046 361 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0046 Lan-Chr9 307892 309816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0046 58 279 C2C2-Dof Transcription Factor Family AT3G55370 44.541 6.23e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan9g0046 zf-Dof 4.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0046 - - gmx:102662809 358.607